Definition Thermoanaerobacter tengcongensis MB4, complete genome.
Accession NC_003869
Length 2,689,445

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The map label for this gene is yccU [C]

Identifier: 20807591

GI number: 20807591

Start: 1134400

End: 1134834

Strand: Direct

Name: yccU [C]

Synonym: TTE1131

Alternate gene names: 20807591

Gene position: 1134400-1134834 (Clockwise)

Preceding gene: 20807590

Following gene: 20807594

Centisome position: 42.18

GC content: 37.93

Gene sequence:

>435_bases
ATGGATTGGGATTATGTAGAGGACGCTATGAAGAGGAAAGTATGGGCAGTTGTAGGTGCGCTTCCTCGCGAGACAAAGTA
CGGTTTTCAGATTTATAAAACCCTCAAATTAAATGGATATACTGCTTATCCTGTAAATCCTAAGTTTGAAGAAGTAGATG
GAGACAAGTGTTATGATTCTCTTTCTAGTTTACCTGTAGTTCCAGAGGTCGTAGATATGGTTGTTCCACCTACAAGAGGA
GAAAAATACGTAGAAGAGGCTGCTAAGTTAGGAGTAGAATTTATATGGTTTCAGCCGGGATCTGAAAGTGAAGAATTGAT
TGAAAAGGCTAAAAATCTAGGATTAAAGGTTATACACAATACTTGCGTGATGTTAGAAACTGACAGAGAAAATAAGAGGG
GATTTCTCCTCTTATTTTCATTTTCGTGGCTTTGA

Upstream 100 bases:

>100_bases
GTCGCTGCGATATAAGAGTAAAAGAAGATGTGTACCTTTTTAAAAAGGATGGAAAATACATTTTGTAAGGGGAGATGGAG
AAGGTTAGGAGGTAGAAAAA

Downstream 100 bases:

>100_bases
GAGGATTTCATATATGCCTATTAAAAATAGCAAAATTGCAAATATTTTCTTAAGAAGAATTGCTTTAGTTACAATAGCTA
TATTGGCACCTACTAGGCTA

Product: CoA-binding protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MDWDYVEDAMKRKVWAVVGALPRETKYGFQIYKTLKLNGYTAYPVNPKFEEVDGDKCYDSLSSLPVVPEVVDMVVPPTRG
EKYVEEAAKLGVEFIWFQPGSESEELIEKAKNLGLKVIHNTCVMLETDRENKRGFLLLFSFSWL

Sequences:

>Translated_144_residues
MDWDYVEDAMKRKVWAVVGALPRETKYGFQIYKTLKLNGYTAYPVNPKFEEVDGDKCYDSLSSLPVVPEVVDMVVPPTRG
EKYVEEAAKLGVEFIWFQPGSESEELIEKAKNLGLKVIHNTCVMLETDRENKRGFLLLFSFSWL
>Mature_144_residues
MDWDYVEDAMKRKVWAVVGALPRETKYGFQIYKTLKLNGYTAYPVNPKFEEVDGDKCYDSLSSLPVVPEVVDMVVPPTRG
EKYVEEAAKLGVEFIWFQPGSESEELIEKAKNLGLKVIHNTCVMLETDRENKRGFLLLFSFSWL

Specific function: Unknown

COG id: COG1832

COG function: function code R; Predicted CoA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16562; Mature: 16562

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWDYVEDAMKRKVWAVVGALPRETKYGFQIYKTLKLNGYTAYPVNPKFEEVDGDKCYDS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCHHHHHH
LSSLPVVPEVVDMVVPPTRGEKYVEEAAKLGVEFIWFQPGSESEELIEKAKNLGLKVIHN
HHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCEEEEEC
TCVMLETDRENKRGFLLLFSFSWL
EEEEEECCCCCCCCEEEEEEECCC
>Mature Secondary Structure
MDWDYVEDAMKRKVWAVVGALPRETKYGFQIYKTLKLNGYTAYPVNPKFEEVDGDKCYDS
CCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCEEECCCCCCCCCCCCHHHHHH
LSSLPVVPEVVDMVVPPTRGEKYVEEAAKLGVEFIWFQPGSESEELIEKAKNLGLKVIHN
HHCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHCCEEEEEC
TCVMLETDRENKRGFLLLFSFSWL
EEEEEECCCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA