Definition Thermoanaerobacter tengcongensis MB4, complete genome.
Accession NC_003869
Length 2,689,445

Click here to switch to the map view.

The map label for this gene is yvyE [H]

Identifier: 20807590

GI number: 20807590

Start: 1133720

End: 1134367

Strand: Direct

Name: yvyE [H]

Synonym: TTE1130

Alternate gene names: 20807590

Gene position: 1133720-1134367 (Clockwise)

Preceding gene: 20807589

Following gene: 20807591

Centisome position: 42.15

GC content: 38.43

Gene sequence:

>648_bases
TTGGGCAAAATTTATAAGACTCTTCTTGGATACGGAGTTGCAGAAGTTGAGATAAAGAAGTCAAAATTTATAGGGCATGC
AAGTCCTGTAGCCTCTGAGGAAGAGGCTATAAAGTTTATAGAGAAAATAAGAGCTGAACACAGACTTGCTACGCACAACG
TGTACGCCTACGTAGTAGGGGAAAATGATGAAATACAGCGGTTTAGCGACGATGGTGAGCCTTCGGGAACAGCTGGTATG
CCTGTCTTAAACGTGATAAAAAAACAGGAACTGAAGAATGTAGTTGTTGTGGTCACAAGATATTTTGGAGGAATATTGTT
GGGAGCAGGTGGTTTAGTCAGGGCATACACAAAAGCAGCTAAGATGGGGATTGATGCGGCAGGAATAGTAGAAAAGATTC
CGGCTAAGGAGCTTGAACTCACTTTTGATTATAATCTGCTTGGAAAAATTCAGAATGAACTTTTAAGAAGAGATTATTTG
ATAAAGGATATCTCTTATGCGGATAAGGTTATTATTACATTGCCTGTCGTAGAAGAGAAAGTTTCAGAGTTTAAGAATTT
TATCACTGACTTGACTGCCAGTCGCTGCGATATAAGAGTAAAAGAAGATGTGTACCTTTTTAAAAAGGATGGAAAATACA
TTTTGTAA

Upstream 100 bases:

>100_bases
TGGCTTAAGGTTGTAAAATAGAAAGGACTTTGATTTTTAAAGCCGGCAACGGCTTTATTTTTTGGCTATAATTTGGTATA
ATGACAAACGGGGTGTTAAT

Downstream 100 bases:

>100_bases
GGGGAGATGGAGAAGGTTAGGAGGTAGAAAAAATGGATTGGGATTATGTAGAGGACGCTATGAAGAGGAAAGTATGGGCA
GTTGTAGGTGCGCTTCCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 214

Protein sequence:

>215_residues
MGKIYKTLLGYGVAEVEIKKSKFIGHASPVASEEEAIKFIEKIRAEHRLATHNVYAYVVGENDEIQRFSDDGEPSGTAGM
PVLNVIKKQELKNVVVVVTRYFGGILLGAGGLVRAYTKAAKMGIDAAGIVEKIPAKELELTFDYNLLGKIQNELLRRDYL
IKDISYADKVIITLPVVEEKVSEFKNFITDLTASRCDIRVKEDVYLFKKDGKYIL

Sequences:

>Translated_215_residues
MGKIYKTLLGYGVAEVEIKKSKFIGHASPVASEEEAIKFIEKIRAEHRLATHNVYAYVVGENDEIQRFSDDGEPSGTAGM
PVLNVIKKQELKNVVVVVTRYFGGILLGAGGLVRAYTKAAKMGIDAAGIVEKIPAKELELTFDYNLLGKIQNELLRRDYL
IKDISYADKVIITLPVVEEKVSEFKNFITDLTASRCDIRVKEDVYLFKKDGKYIL
>Mature_214_residues
GKIYKTLLGYGVAEVEIKKSKFIGHASPVASEEEAIKFIEKIRAEHRLATHNVYAYVVGENDEIQRFSDDGEPSGTAGMP
VLNVIKKQELKNVVVVVTRYFGGILLGAGGLVRAYTKAAKMGIDAAGIVEKIPAKELELTFDYNLLGKIQNELLRRDYLI
KDISYADKVIITLPVVEEKVSEFKNFITDLTASRCDIRVKEDVYLFKKDGKYIL

Specific function: Unknown

COG id: COG1739

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IMPACT family [H]

Homologues:

Organism=Escherichia coli, GI87082338, Length=178, Percent_Identity=38.2022471910112, Blast_Score=93, Evalue=1e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009022
- InterPro:   IPR020568
- InterPro:   IPR000640
- InterPro:   IPR015796
- InterPro:   IPR015269
- InterPro:   IPR020569
- InterPro:   IPR001498 [H]

Pfam domain/function: PF09186 DUF1949; PF01205 UPF0029 [H]

EC number: NA

Molecular weight: Translated: 24035; Mature: 23904

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: PS00910 UPF0029

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIYKTLLGYGVAEVEIKKSKFIGHASPVASEEEAIKFIEKIRAEHRLATHNVYAYVVG
CCHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEEEEC
ENDEIQRFSDDGEPSGTAGMPVLNVIKKQELKNVVVVVTRYFGGILLGAGGLVRAYTKAA
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH
KMGIDAAGIVEKIPAKELELTFDYNLLGKIQNELLRRDYLIKDISYADKVIITLPVVEEK
HHCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH
VSEFKNFITDLTASRCDIRVKEDVYLFKKDGKYIL
HHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCC
>Mature Secondary Structure 
GKIYKTLLGYGVAEVEIKKSKFIGHASPVASEEEAIKFIEKIRAEHRLATHNVYAYVVG
CHHHHHHHCCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEECCEEEEEEC
ENDEIQRFSDDGEPSGTAGMPVLNVIKKQELKNVVVVVTRYFGGILLGAGGLVRAYTKAA
CCCCHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHH
KMGIDAAGIVEKIPAKELELTFDYNLLGKIQNELLRRDYLIKDISYADKVIITLPVVEEK
HHCCCHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHHH
VSEFKNFITDLTASRCDIRVKEDVYLFKKDGKYIL
HHHHHHHHHHHHHCCCCEEEECCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3141378; 8313894 [H]