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The map label for this gene is RecO [H]

Identifier: 20807456

GI number: 20807456

Start: 978217

End: 978990

Strand: Direct

Name: RecO [H]

Synonym: TTE0976

Alternate gene names: 20807456

Gene position: 978217-978990 (Clockwise)

Preceding gene: 20807455

Following gene: 20807457

Centisome position: 36.37

GC content: 34.63

Gene sequence:

>774_bases
GTGGAAAAAACAAGGTTTAGGTTGATAAAAATGCGCTTTTTAAAAACAGAGGCAATAGTTTTAAAGAGCAATTTGATAAG
CGAGAAGGATAAAATTGCTACTCTTTTCACCAGAGATTACGGGAAACTGCAGGCGGTCGCTAAAGGAGCTAGGCGCTCGA
AAAGCCGGTTTGTAAATGCTGTAAGGCCTTTTATTGTGGCTAATTACGTGATTTTTGAAGGTCAGAACTATTACTACATT
GACCAGTGGGAGCTTGTAAAAAACTTTGAAAACATAGAAAAAGACCTCAAAAAGTTTGCTTTGGCTTCCTATATAAGTGA
GACCATTTCAAGAGTACTAGAGGAAAAGCAGAAAAACACAAAACTATACTTTTTTACAAAACATTCGCTGGAAGCTGTAG
AGAGTTTAAACGTAGAGACATCTATTTTTCTCTTTTCTTACACTTTAAAATTGATATCCCTTTTGGGCTACATGCCTGTT
TTGGACAGCTGTGCTGTTTGTGGGAAAAAAGAAAATTTAAGTTATTTTTCTTCTTCTTGCGGTGGGGCTGTTTGTAAAGA
TTGTAACGAAACTTGTAAAGATGCAAAATTTTTAAATAAAAAAGTCTTAAAGTTTTTGCTGTATCTTTTAAAAGCTAAGT
ATGAAAAGCTTGAAAGAATTTCTGTGCCAGGAGTTATAAAAGAGGAAGCGGATAAAATAATAACAGAGTATGTGAGAACT
CACCTTGAAATGGACTTTAAATCCAAAGACTTTGCCATGAAATTGAGCGATTAA

Upstream 100 bases:

>100_bases
AAGCTTCCGGCGGAATAAGAAGCTATGAAGATGCAAAAGCGATGATAGAAGCAGGGGCTAACAGGATTGGAGCTAGTGCG
GGTGTTAAAATAGTAGAGGA

Downstream 100 bases:

>100_bases
AGAAGGGAGGGAGAAGAATGGTGGACGAACAACTGGAAAAAATAGACATGATTGTGGAGAGAACGGGGGTAAGTTACAAA
GAGGCAAAAGAGGCTCTGGA

Product: recombinational DNA repair protein

Products: NA

Alternate protein names: Recombination protein O [H]

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MEKTRFRLIKMRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYVIFEGQNYYYI
DQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNTKLYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPV
LDSCAVCGKKENLSYFSSSCGGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLERISVPGVIKEEADKIITEYVRT
HLEMDFKSKDFAMKLSD

Sequences:

>Translated_257_residues
MEKTRFRLIKMRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYVIFEGQNYYYI
DQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNTKLYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPV
LDSCAVCGKKENLSYFSSSCGGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLERISVPGVIKEEADKIITEYVRT
HLEMDFKSKDFAMKLSD
>Mature_257_residues
MEKTRFRLIKMRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNAVRPFIVANYVIFEGQNYYYI
DQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNTKLYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPV
LDSCAVCGKKENLSYFSSSCGGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLERISVPGVIKEEADKIITEYVRT
HLEMDFKSKDFAMKLSD

Specific function: Involved in DNA repair and recF pathway recombination [H]

COG id: COG1381

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recO family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001164
- InterPro:   IPR022572
- InterPro:   IPR016027
- InterPro:   IPR003717 [H]

Pfam domain/function: PF02565 RecO; PF11967 RecO_N [H]

EC number: NA

Molecular weight: Translated: 29815; Mature: 29815

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKTRFRLIKMRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRPFIVANYVIFEGQNYYYIDQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNT
HHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSC
EEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
GGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLERISVPGVIKEEADKIITEYVRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HLEMDFKSKDFAMKLSD
HHHCCCCCCCCEEEECC
>Mature Secondary Structure
MEKTRFRLIKMRFLKTEAIVLKSNLISEKDKIATLFTRDYGKLQAVAKGARRSKSRFVNA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VRPFIVANYVIFEGQNYYYIDQWELVKNFENIEKDLKKFALASYISETISRVLEEKQKNT
HHHHHHHHEEEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KLYFFTKHSLEAVESLNVETSIFLFSYTLKLISLLGYMPVLDSCAVCGKKENLSYFSSSC
EEEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCC
GGAVCKDCNETCKDAKFLNKKVLKFLLYLLKAKYEKLERISVPGVIKEEADKIITEYVRT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
HLEMDFKSKDFAMKLSD
HHHCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336 [H]