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The map label for this gene is SpoIVFB

Identifier: 20807389

GI number: 20807389

Start: 915790

End: 916626

Strand: Direct

Name: SpoIVFB

Synonym: TTE0908

Alternate gene names: NA

Gene position: 915790-916626 (Clockwise)

Preceding gene: 20807388

Following gene: 20807390

Centisome position: 34.05

GC content: 34.05

Gene sequence:

>837_bases
ATGAAGGTAAAAGTCCACTTTTCTACTTTTGTGTTTGGATTGCTTTTGATTTTTTTAGGCTTTGTGAAAGAACTTTTCAG
CATATTTCTTGTGGTGTGTGTGCACGAAACGGGACATGTTTTGGCGGCAAAAAAGCTTAAGGTGGAAGTTTTAGAAGTAA
ATATATATCCTTTTGGGGGAGTGGCTTTTCTAGATCCAACTGTTTTTATACGTCCGGATTTGGAAATTCTAATAGCGCTG
GCTGGTCCTTTTTTTAATATCTTTTTTGCTTTTTTATCTGAGCTATTTTCCCAAATTTTTGATATAAGACTTGACTATTT
TATAAAAGCCAATCTGATAATGGCTTTTTTTAATCTTTTGCCAGGACTACCTCTTGACGGAGGCAGGATTTTGAAAAGTT
TCCTGTCTTACTTTCTCAGTTTAAGGAGCGCGATTCTTGTTTCAACTTATGGGACCTATCTCATTTCCTTTAGCCTCTTG
TGGGTTTCCTTCAAAGACATTTCCCAGGTGAGCAGGAATGTTTTATATACATTTTTAGCAGTGCTTCTTGTAATTGCAGC
AAATAAAGAAAAAAAGATGTCTGCTTTTTTGCAGATGAGAAATTTATACAGAAAAAAAGTAGAATTTTATAAAAAAGGAA
CGATGGCTGTTCACCATCTGGCAGTATCTGAAAAAGCGAAGCTGAAAGATATAATAAAAAATTTTATGCCGTCGAAGTAC
CATGTTATAATAATATTAGACAGCAATTTGAGGGAAAAATATAGGATGACAGAATCAGAATTTTTTGAAAAAGCTTTAGA
ATATGGGCTGAACAGCTGTATAGGTGATATTTTGTAA

Upstream 100 bases:

>100_bases
TTACGGCTCCTCACCTTCACTTTGAAGTTTGGGAAAATGGCAAGCCCATAGACCCTCTGACAAAGGTAGTGATAAATGAG
GCTGCCAGTGAGGAGAGAAA

Downstream 100 bases:

>100_bases
AATTAAGAAAAACACTGGAGGAGGAAGAATGGATATAAAGGAAAAAGTTGATTCCCTCCTTATGAAGGTGAGCAAGCCTA
CCCGCTATACAGGAGGGGAA

Product: Zn-dependent protease

Products: NA

Alternate protein names: Site-2-type intermembrane protease [H]

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MKVKVHFSTFVFGLLLIFLGFVKELFSIFLVVCVHETGHVLAAKKLKVEVLEVNIYPFGGVAFLDPTVFIRPDLEILIAL
AGPFFNIFFAFLSELFSQIFDIRLDYFIKANLIMAFFNLLPGLPLDGGRILKSFLSYFLSLRSAILVSTYGTYLISFSLL
WVSFKDISQVSRNVLYTFLAVLLVIAANKEKKMSAFLQMRNLYRKKVEFYKKGTMAVHHLAVSEKAKLKDIIKNFMPSKY
HVIIILDSNLREKYRMTESEFFEKALEYGLNSCIGDIL

Sequences:

>Translated_278_residues
MKVKVHFSTFVFGLLLIFLGFVKELFSIFLVVCVHETGHVLAAKKLKVEVLEVNIYPFGGVAFLDPTVFIRPDLEILIAL
AGPFFNIFFAFLSELFSQIFDIRLDYFIKANLIMAFFNLLPGLPLDGGRILKSFLSYFLSLRSAILVSTYGTYLISFSLL
WVSFKDISQVSRNVLYTFLAVLLVIAANKEKKMSAFLQMRNLYRKKVEFYKKGTMAVHHLAVSEKAKLKDIIKNFMPSKY
HVIIILDSNLREKYRMTESEFFEKALEYGLNSCIGDIL
>Mature_278_residues
MKVKVHFSTFVFGLLLIFLGFVKELFSIFLVVCVHETGHVLAAKKLKVEVLEVNIYPFGGVAFLDPTVFIRPDLEILIAL
AGPFFNIFFAFLSELFSQIFDIRLDYFIKANLIMAFFNLLPGLPLDGGRILKSFLSYFLSLRSAILVSTYGTYLISFSLL
WVSFKDISQVSRNVLYTFLAVLLVIAANKEKKMSAFLQMRNLYRKKVEFYKKGTMAVHHLAVSEKAKLKDIIKNFMPSKY
HVIIILDSNLREKYRMTESEFFEKALEYGLNSCIGDIL

Specific function: Unknown

COG id: COG1994

COG function: function code R; Zn-dependent proteases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR008915
- InterPro:   IPR016483 [H]

Pfam domain/function: PF00571 CBS; PF02163 Peptidase_M50 [H]

EC number: NA

Molecular weight: Translated: 31901; Mature: 31901

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKVHFSTFVFGLLLIFLGFVKELFSIFLVVCVHETGHVLAAKKLKVEVLEVNIYPFGG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHEEEEEEEEEEECCCC
VAFLDPTVFIRPDLEILIALAGPFFNIFFAFLSELFSQIFDIRLDYFIKANLIMAFFNLL
EEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLPLDGGRILKSFLSYFLSLRSAILVSTYGTYLISFSLLWVSFKDISQVSRNVLYTFLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVIAANKEKKMSAFLQMRNLYRKKVEFYKKGTMAVHHLAVSEKAKLKDIIKNFMPSKY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
HVIIILDSNLREKYRMTESEFFEKALEYGLNSCIGDIL
EEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKVKVHFSTFVFGLLLIFLGFVKELFSIFLVVCVHETGHVLAAKKLKVEVLEVNIYPFGG
CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHEEEEEEEEEEECCCC
VAFLDPTVFIRPDLEILIALAGPFFNIFFAFLSELFSQIFDIRLDYFIKANLIMAFFNLL
EEEECCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PGLPLDGGRILKSFLSYFLSLRSAILVSTYGTYLISFSLLWVSFKDISQVSRNVLYTFLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLVIAANKEKKMSAFLQMRNLYRKKVEFYKKGTMAVHHLAVSEKAKLKDIIKNFMPSKY
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCE
HVIIILDSNLREKYRMTESEFFEKALEYGLNSCIGDIL
EEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]