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The map label for this gene is yhbA [H]

Identifier: 20807278

GI number: 20807278

Start: 792859

End: 793548

Strand: Direct

Name: yhbA [H]

Synonym: TTE0796

Alternate gene names: 20807278

Gene position: 792859-793548 (Clockwise)

Preceding gene: 20807275

Following gene: 20807279

Centisome position: 29.48

GC content: 42.32

Gene sequence:

>690_bases
ATGGACAAACAGGAGATTTTGGAGAAAAAGATAAAAGAGTGGGGAGCTTCTCTGGTGGGGTTTTCGAATCTTGAGGAGAT
TGTACCTGAGAATCTTTCTGATATTCCCTATGGAATTAGTATTGTAATTAAACTGTCTGACAGGATAGTAGATGAAATAA
CAGACAAACCCACACACACCTATTATCATCACTACAGGGCAGTAAATAATCTGATTGATCTGATAACTTTAAGAACAGTG
CTTTTACTTGAGGAATGGGGGTACAAAGCTTTGGCTGTACCTGCTTCTCAGTCGATTGCAGATCTGGGAGAGTACAGAGG
GCTTTTTCCTCATAAAACTGCTGCTACCCGTGCAGGCTTAGGATGGATAGGTAAAAATGGGCTTCTCGTGACAGAAGAGT
ATGGGCCCCGCGTCAGACTAGGAACGGTTCTAACAAATATGCCTTTAAGGACAGGAACACCTATAACACAGAGCAGGTGT
GGTAGCTGCAGGATATGTGTTGATGCCTGCCCTGCTATGGCTCTTTACGGTACCTTGTGGAAAGAAGGAATTCCAAGAGA
AGAGATAGTAGATGCTAAAGCTTGCAGTGAATACATGAAAAATTTTAAACACATAGGTAGAGGGCATGTTTGCGGAATTT
GCATGGAAGTGTGTCCTTATGGAAAGAGGAAAAAATCTGTTGACAGGTGA

Upstream 100 bases:

>100_bases
ACATACTGCAGAAATATACTTTGAAAAAATTTTAAAAAATAGATTTTGTTGTGCTAAAATATTTGTATAGCAAAAATTTT
GGCAAAGGGTGGATAAATTT

Downstream 100 bases:

>100_bases
AAAGGTTTTTGATACAATGAAAATGAAGTAACCAAAACGTTTTGGGAAAGGTGAAGGAGATGGCGGTTACAATAAAAGAC
ATAGCAAAATATGCAGGGGT

Product: uncharacterized Fe-S protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MDKQEILEKKIKEWGASLVGFSNLEEIVPENLSDIPYGISIVIKLSDRIVDEITDKPTHTYYHHYRAVNNLIDLITLRTV
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEEYGPRVRLGTVLTNMPLRTGTPITQSRC
GSCRICVDACPAMALYGTLWKEGIPREEIVDAKACSEYMKNFKHIGRGHVCGICMEVCPYGKRKKSVDR

Sequences:

>Translated_229_residues
MDKQEILEKKIKEWGASLVGFSNLEEIVPENLSDIPYGISIVIKLSDRIVDEITDKPTHTYYHHYRAVNNLIDLITLRTV
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEEYGPRVRLGTVLTNMPLRTGTPITQSRC
GSCRICVDACPAMALYGTLWKEGIPREEIVDAKACSEYMKNFKHIGRGHVCGICMEVCPYGKRKKSVDR
>Mature_229_residues
MDKQEILEKKIKEWGASLVGFSNLEEIVPENLSDIPYGISIVIKLSDRIVDEITDKPTHTYYHHYRAVNNLIDLITLRTV
LLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGLGWIGKNGLLVTEEYGPRVRLGTVLTNMPLRTGTPITQSRC
GSCRICVDACPAMALYGTLWKEGIPREEIVDAKACSEYMKNFKHIGRGHVCGICMEVCPYGKRKKSVDR

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 25611; Mature: 25611

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKQEILEKKIKEWGASLVGFSNLEEIVPENLSDIPYGISIVIKLSDRIVDEITDKPTHT
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH
YYHHYRAVNNLIDLITLRTVLLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCC
GWIGKNGLLVTEEYGPRVRLGTVLTNMPLRTGTPITQSRCGSCRICVDACPAMALYGTLW
CEECCCCEEEECCCCCCEEEHHHHHCCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHH
KEGIPREEIVDAKACSEYMKNFKHIGRGHVCGICMEVCPYGKRKKSVDR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDKQEILEKKIKEWGASLVGFSNLEEIVPENLSDIPYGISIVIKLSDRIVDEITDKPTHT
CCHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCEEEEEEHHHHHHHHHCCCCCHH
YYHHYRAVNNLIDLITLRTVLLLEEWGYKALAVPASQSIADLGEYRGLFPHKTAATRAGL
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCCCHHHHHCCC
GWIGKNGLLVTEEYGPRVRLGTVLTNMPLRTGTPITQSRCGSCRICVDACPAMALYGTLW
CEECCCCEEEECCCCCCEEEHHHHHCCCCCCCCCCCHHCCCCCEEHHHHHHHHHHHHHHH
KEGIPREEIVDAKACSEYMKNFKHIGRGHVCGICMEVCPYGKRKKSVDR
HCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]