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The map label for this gene is sdpI [H]

Identifier: 20807164

GI number: 20807164

Start: 679262

End: 679924

Strand: Direct

Name: sdpI [H]

Synonym: TTE0675

Alternate gene names: 20807164

Gene position: 679262-679924 (Clockwise)

Preceding gene: 20807163

Following gene: 20807165

Centisome position: 25.26

GC content: 31.22

Gene sequence:

>663_bases
ATGGATGAAAACTACAATGTCAAATACGAAATAAAAAAGGATTTGTGGTTAATTGGCATTATCATATTAATATGGATTTT
TACATTTGCCATTTTTGGACGTTTACCGGCTAAAATTCCAATACATTGGAACATTTCGGGTCAAGTAGACAGTTTTGGCC
CAAAACATGATATATTTATTTTGCCTTCTATCATTACAATAATATATTTTGTAATGTTATGTGTACCTATTATTGATCCT
AAAAGAGCCAATTATGACAAATTTGCTGGAGCTTATAGAATGATAAGAGCAGTTGTAGTAATTATTTTGTCAGCAGTATA
TTTTGCTTCTGCATATTCTGTATTAGGTTATAGAATTGATGTAAATAGAATGGGCAATCTTATTATTCCTTTTATGTTGA
TTGGTTTTGGGAGTGTTATGGGTAAACTTCGCCATAATTATTTTGTAGGTATAAGAACTCCCTGGACGTTAGCAGATGAA
GAGGTATGGAATAATACACATCAGCTAGCTGAAAAACTATGGCTCATTGCAGGTATTATTGGCTTATTTGCTTCCTTTTT
CAGAGGTACATGGGTTACTGTTTTTATGTTTGTGCTGCTAATTACTGCTGTTATAGTACCCATTGTATATTCTTATATAA
TTTTTAAAAACAAAGAAAAGTAG

Upstream 100 bases:

>100_bases
TCTTCTGTACCAAGCAAAAAAACTATTGAGAACTTTGCAATAGATTTATTTACAGAGGAATAGGGTTGTCATACAACATG
AGGGGAGTGTTTAATGTAGT

Downstream 100 bases:

>100_bases
AGGATGGATGAGATTGCATTAAAGTTTTTTATGATATGGTTATGAGGGTAAGGGGACACAGGGACTTGTCTGAGAAAATT
GAGATAAATAGAATTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDENYNVKYEIKKDLWLIGIIILIWIFTFAIFGRLPAKIPIHWNISGQVDSFGPKHDIFILPSIITIIYFVMLCVPIIDP
KRANYDKFAGAYRMIRAVVVIILSAVYFASAYSVLGYRIDVNRMGNLIIPFMLIGFGSVMGKLRHNYFVGIRTPWTLADE
EVWNNTHQLAEKLWLIAGIIGLFASFFRGTWVTVFMFVLLITAVIVPIVYSYIIFKNKEK

Sequences:

>Translated_220_residues
MDENYNVKYEIKKDLWLIGIIILIWIFTFAIFGRLPAKIPIHWNISGQVDSFGPKHDIFILPSIITIIYFVMLCVPIIDP
KRANYDKFAGAYRMIRAVVVIILSAVYFASAYSVLGYRIDVNRMGNLIIPFMLIGFGSVMGKLRHNYFVGIRTPWTLADE
EVWNNTHQLAEKLWLIAGIIGLFASFFRGTWVTVFMFVLLITAVIVPIVYSYIIFKNKEK
>Mature_220_residues
MDENYNVKYEIKKDLWLIGIIILIWIFTFAIFGRLPAKIPIHWNISGQVDSFGPKHDIFILPSIITIIYFVMLCVPIIDP
KRANYDKFAGAYRMIRAVVVIILSAVYFASAYSVLGYRIDVNRMGNLIIPFMLIGFGSVMGKLRHNYFVGIRTPWTLADE
EVWNNTHQLAEKLWLIAGIIGLFASFFRGTWVTVFMFVLLITAVIVPIVYSYIIFKNKEK

Specific function: Immunity protein that provides protection for the cell against the toxic effects of its own sdpC killing factor, and that functions as a receptor/signal transduction protein as well. Once sdpC accumulates in the extracellular milieu, sdpI binds to sdpC, c

COG id: COG5658

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012867 [H]

Pfam domain/function: PF07853 DUF1648 [H]

EC number: NA

Molecular weight: Translated: 25367; Mature: 25367

Theoretical pI: Translated: 9.84; Mature: 9.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDENYNVKYEIKKDLWLIGIIILIWIFTFAIFGRLPAKIPIHWNISGQVDSFGPKHDIFI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEE
LPSIITIIYFVMLCVPIIDPKRANYDKFAGAYRMIRAVVVIILSAVYFASAYSVLGYRID
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
VNRMGNLIIPFMLIGFGSVMGKLRHNYFVGIRTPWTLADEEVWNNTHQLAEKLWLIAGII
HHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
GLFASFFRGTWVTVFMFVLLITAVIVPIVYSYIIFKNKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDENYNVKYEIKKDLWLIGIIILIWIFTFAIFGRLPAKIPIHWNISGQVDSFGPKHDIFI
CCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCEEE
LPSIITIIYFVMLCVPIIDPKRANYDKFAGAYRMIRAVVVIILSAVYFASAYSVLGYRID
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
VNRMGNLIIPFMLIGFGSVMGKLRHNYFVGIRTPWTLADEEVWNNTHQLAEKLWLIAGII
HHHCCCHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHH
GLFASFFRGTWVTVFMFVLLITAVIVPIVYSYIIFKNKEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]