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The map label for this gene is 20807165

Identifier: 20807165

GI number: 20807165

Start: 680045

End: 681214

Strand: Direct

Name: 20807165

Synonym: TTE0676

Alternate gene names: NA

Gene position: 680045-681214 (Clockwise)

Preceding gene: 20807164

Following gene: 20807166

Centisome position: 25.29

GC content: 32.31

Gene sequence:

>1170_bases
ATGTTAATACAATGTACAAAAAAGTTGTTGGATGTGATAGAGAGAAAACCTGTGGCATATGAAGAAAAAAATTTGCTATT
TTCCTGGCATGCGAATTTAATTACATTAAATCGAAGAAAGACTGTAGTTCTTGTAAATGATAAAAACAGATATGTGGTTG
TTTTATATGGACTTAAAGCGAAGGATTTTAAAAGGTTTGATGAAATTATTTTAAATGCTATTCGACTGACGTTAGTGGAT
GAATGTATTGATGAAGAAATTGTGGAAGAGTACATAAGACAATCGGGAGAAGTTTTATATGGGAAAACAAAAAATAGTAG
TTATGTAGGGAAAATGAATACGGCTTGTAATGTGGTGTACTTATATGAAGATTTACTTTTGGACAATACAATTTATCAAA
CTTTTGTAAGCAAAAAGACAAGCCGTTATTGGGTGGGCAAACAGGAAGAAGGATATATATCTCCAAGTAAAGAAATGTTT
AAAGATTTAGAAGCTTTTGCAGGTAGACCCATTTTTAAATGCAGGGCAGTAGAGTTAAAAGTAACACTTGAAATGGAAAA
TCATAATATTTGGCGTAGGCTCATTGTCCCTTTAAATAGTACATTTACACAGTTTCACAAGGTACTTCAGGCTGCTTTTG
GCTGGCTGGATTATCATCTTCACGAATTTTTTGTTTATGGGGATGAGAGATGGGATATTTTGCATATTGATATCAACTAT
TTTATTAATCATCCTGCTTATAATAAAGCAGGATACAAACCAGTTGTAAATTTGGTTAGCGATGAGGAAGCCTTTGATTA
TCCAAGGAAAGATGGTATAGAGAGGAAATTAGAAAAGGGGATAAGACTATCAGAGTATATTCCAAAATACAAAAGGCTGC
AATATGTCTATGATTTTGGAGATGATTGGCGACATTATATTGAAGTAGAAAGAGTGATAGAGGATTATGATAAGAATTAT
GCTATTTGTGTTGATGGAGAAGGAAACGCCCCGCCTGAAGATGTAGGCGGTGAATATGGCTATGATAAATTTTTGGAGAT
AATTTCTGATAAAAATAATCCAGAATATGAGGATATGTTAATTTGGGGCAAATATCAAGGGTATAGGGATTTTGATATTG
AGGATGTAAATAAAAATATTAAATTTGCTTATGATTCCTTTTTATTATGA

Upstream 100 bases:

>100_bases
AAAGTTTTTTATGATATGGTTATGAGGGTAAGGGGACACAGGGACTTGTCTGAGAAAATTGAGATAAATAGAATTTTTAT
GTAGATTGGTGTGATAGGCT

Downstream 100 bases:

>100_bases
AATGTTATTACTAACTCTATATATTACTTTTATACATGGTAGAGATATGGAGGAGCATATTAAAAGACGTGCCAAAAAAA
GAATCAAGAAGGAAAGATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 389; Mature: 389

Protein sequence:

>389_residues
MLIQCTKKLLDVIERKPVAYEEKNLLFSWHANLITLNRRKTVVLVNDKNRYVVVLYGLKAKDFKRFDEIILNAIRLTLVD
ECIDEEIVEEYIRQSGEVLYGKTKNSSYVGKMNTACNVVYLYEDLLLDNTIYQTFVSKKTSRYWVGKQEEGYISPSKEMF
KDLEAFAGRPIFKCRAVELKVTLEMENHNIWRRLIVPLNSTFTQFHKVLQAAFGWLDYHLHEFFVYGDERWDILHIDINY
FINHPAYNKAGYKPVVNLVSDEEAFDYPRKDGIERKLEKGIRLSEYIPKYKRLQYVYDFGDDWRHYIEVERVIEDYDKNY
AICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYEDMLIWGKYQGYRDFDIEDVNKNIKFAYDSFLL

Sequences:

>Translated_389_residues
MLIQCTKKLLDVIERKPVAYEEKNLLFSWHANLITLNRRKTVVLVNDKNRYVVVLYGLKAKDFKRFDEIILNAIRLTLVD
ECIDEEIVEEYIRQSGEVLYGKTKNSSYVGKMNTACNVVYLYEDLLLDNTIYQTFVSKKTSRYWVGKQEEGYISPSKEMF
KDLEAFAGRPIFKCRAVELKVTLEMENHNIWRRLIVPLNSTFTQFHKVLQAAFGWLDYHLHEFFVYGDERWDILHIDINY
FINHPAYNKAGYKPVVNLVSDEEAFDYPRKDGIERKLEKGIRLSEYIPKYKRLQYVYDFGDDWRHYIEVERVIEDYDKNY
AICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYEDMLIWGKYQGYRDFDIEDVNKNIKFAYDSFLL
>Mature_389_residues
MLIQCTKKLLDVIERKPVAYEEKNLLFSWHANLITLNRRKTVVLVNDKNRYVVVLYGLKAKDFKRFDEIILNAIRLTLVD
ECIDEEIVEEYIRQSGEVLYGKTKNSSYVGKMNTACNVVYLYEDLLLDNTIYQTFVSKKTSRYWVGKQEEGYISPSKEMF
KDLEAFAGRPIFKCRAVELKVTLEMENHNIWRRLIVPLNSTFTQFHKVLQAAFGWLDYHLHEFFVYGDERWDILHIDINY
FINHPAYNKAGYKPVVNLVSDEEAFDYPRKDGIERKLEKGIRLSEYIPKYKRLQYVYDFGDDWRHYIEVERVIEDYDKNY
AICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYEDMLIWGKYQGYRDFDIEDVNKNIKFAYDSFLL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To A.rhizogenes plasmid pRia4B ORF-3 in virA region [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012912 [H]

Pfam domain/function: PF07929 PRiA4_ORF3 [H]

EC number: NA

Molecular weight: Translated: 46165; Mature: 46165

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIQCTKKLLDVIERKPVAYEEKNLLFSWHANLITLNRRKTVVLVNDKNRYVVVLYGLKA
CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCC
KDFKRFDEIILNAIRLTLVDECIDEEIVEEYIRQSGEVLYGKTKNSSYVGKMNTACNVVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEE
LYEDLLLDNTIYQTFVSKKTSRYWVGKQEEGYISPSKEMFKDLEAFAGRPIFKCRAVELK
EEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
VTLEMENHNIWRRLIVPLNSTFTQFHKVLQAAFGWLDYHLHEFFVYGDERWDILHIDINY
EEEEECCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEEE
FINHPAYNKAGYKPVVNLVSDEEAFDYPRKDGIERKLEKGIRLSEYIPKYKRLQYVYDFG
EECCCCCCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHHCCCCHHHHCCHHHHEEEEECCC
DDWRHYIEVERVIEDYDKNYAICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYEDML
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHEE
IWGKYQGYRDFDIEDVNKNIKFAYDSFLL
EEEECCCCCCCCHHHCCCCCEEEHHHHCC
>Mature Secondary Structure
MLIQCTKKLLDVIERKPVAYEEKNLLFSWHANLITLNRRKTVVLVNDKNRYVVVLYGLKA
CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCEEEEECCEEEEEEECCCCEEEEEECCCC
KDFKRFDEIILNAIRLTLVDECIDEEIVEEYIRQSGEVLYGKTKNSSYVGKMNTACNVVY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCEEEEE
LYEDLLLDNTIYQTFVSKKTSRYWVGKQEEGYISPSKEMFKDLEAFAGRPIFKCRAVELK
EEHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEEEE
VTLEMENHNIWRRLIVPLNSTFTQFHKVLQAAFGWLDYHLHEFFVYGDERWDILHIDINY
EEEEECCCCEEEHEEECCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEEEEEEEEE
FINHPAYNKAGYKPVVNLVSDEEAFDYPRKDGIERKLEKGIRLSEYIPKYKRLQYVYDFG
EECCCCCCCCCCCHHHHHCCCCHHHCCCCCCCHHHHHHCCCCHHHHCCHHHHEEEEECCC
DDWRHYIEVERVIEDYDKNYAICVDGEGNAPPEDVGGEYGYDKFLEIISDKNNPEYEDML
CHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCHHHEE
IWGKYQGYRDFDIEDVNKNIKFAYDSFLL
EEEECCCCCCCCHHHCCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]