| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20807160
Identifier: 20807160
GI number: 20807160
Start: 672665
End: 673768
Strand: Direct
Name: 20807160
Synonym: TTE0670
Alternate gene names: NA
Gene position: 672665-673768 (Clockwise)
Preceding gene: 20807159
Following gene: 20807161
Centisome position: 25.01
GC content: 42.39
Gene sequence:
>1104_bases GTGGATACTTTAGTTTCACTAGCAACTAAATCCAATGTCTCGCAACTTAATCTTGGATTAGAAGCTACTTCTATTTTCAG TATTCCACTTAGAGATTTCCTTTTGGATGCACCTCAGTTAAAGCCTTATTCGGTCCAGGTGTATGAAATTAATCCTTCTC TTGTATCCGGGTTTAAAAAAGCTTTCGGCTCAAGACTCCCTAAAACTGATGACTTAGATGCCTATATAATTGCTGAGAGG CTTCGCTTTGGACATCTTACTCCATACAGCCATGAAGTTTCTGTTACTGCACCTTTGCGTCAGCTTACAAGGCTTAGATT ACATCTTGTCGAACTCCTTGTTGATGAGAAAAATCGAGCTTTGAATTTGCTCTTTTTGAAATTCTCTAATTACAAACAGG ATAATCCCTTTACCAACGTCTTTGGCAGAGCGTCCATTGAAGTCCTGAAAGAATTTACCCCTGATGAAATAGCTCAGATA TCCATAGAAGAACTTGCAGAGTTTATTCAGTCTCACGGAAAAAACAGATTCACTAATCCTGAAGAAATCGCTACTGCTCT AAAGCAAGCCGCAAACCGTGCTTACCGCCTAAACTCTAAAATGGAACAGGCCTGTGAGATAGCTCTTTCTTTAACTCTTC AAAACATTGAGCATCTCAAAAGGCAGATTAAAAGCCTTGATAAGGTTATTTCCAGAGAGCTTAAAGCTATCCCTCAAACA CTTACTACAGTTAAGGGTTTAGGCGATGTGTCGGCTGCAGGAATAATCGCTGAAATAGGCGATATTAAGCGTTTTAAAAA CGAAGCTTCTCTTGCTCAGTATGCTGGCCTCACCTGTACCCGTTATCAGTCGGGCGACTTTGACGCTGAAGAGCGTCGTT TGACAAAGAGCGGGAACAAATACCTCCGCTATTACTTGGTCATGGCCGCAAACTCGTTGCGGGTGCACAACGAGGAATAC AAGGCCTATTATCAGACCAAGTATCAGGAGGTTCAAAAGCACCAGCATAAGAGAGCGCTGGTATTGACTGCCCGCAAACT TGTTAGGCTGGTCTTTGCACTGCTGAGCAAAGGCCAAATCTACAAAGGGGCGGTGAAGAGTTAA
Upstream 100 bases:
>100_bases CAGTGCCTCTAAGCTGGATCTCGTATGCATCGATGAAAATGGTAATCAACTTTCTCCTGCTAGGTCTTTCTCCAATAATG CTGAGGGCGCAAATGCGCTG
Downstream 100 bases:
>100_bases TTTTGTCTTTTAAAACCTATTAATTGCTACTTTTGAAGCCAATTTTTACCATATTAATTGGCTAAGGGTATTATTGTCTT TTTTTGCTTTGATAATTTTA
Product: transposase
Products: NA
Alternate protein names: Transposase Domain Protein; ISChy1 Transposase; Transposase Family Protein; ISChy2 Transposase; Orf_Bo
Number of amino acids: Translated: 367; Mature: 367
Protein sequence:
>367_residues MDTLVSLATKSNVSQLNLGLEATSIFSIPLRDFLLDAPQLKPYSVQVYEINPSLVSGFKKAFGSRLPKTDDLDAYIIAER LRFGHLTPYSHEVSVTAPLRQLTRLRLHLVELLVDEKNRALNLLFLKFSNYKQDNPFTNVFGRASIEVLKEFTPDEIAQI SIEELAEFIQSHGKNRFTNPEEIATALKQAANRAYRLNSKMEQACEIALSLTLQNIEHLKRQIKSLDKVISRELKAIPQT LTTVKGLGDVSAAGIIAEIGDIKRFKNEASLAQYAGLTCTRYQSGDFDAEERRLTKSGNKYLRYYLVMAANSLRVHNEEY KAYYQTKYQEVQKHQHKRALVLTARKLVRLVFALLSKGQIYKGAVKS
Sequences:
>Translated_367_residues MDTLVSLATKSNVSQLNLGLEATSIFSIPLRDFLLDAPQLKPYSVQVYEINPSLVSGFKKAFGSRLPKTDDLDAYIIAER LRFGHLTPYSHEVSVTAPLRQLTRLRLHLVELLVDEKNRALNLLFLKFSNYKQDNPFTNVFGRASIEVLKEFTPDEIAQI SIEELAEFIQSHGKNRFTNPEEIATALKQAANRAYRLNSKMEQACEIALSLTLQNIEHLKRQIKSLDKVISRELKAIPQT LTTVKGLGDVSAAGIIAEIGDIKRFKNEASLAQYAGLTCTRYQSGDFDAEERRLTKSGNKYLRYYLVMAANSLRVHNEEY KAYYQTKYQEVQKHQHKRALVLTARKLVRLVFALLSKGQIYKGAVKS >Mature_367_residues MDTLVSLATKSNVSQLNLGLEATSIFSIPLRDFLLDAPQLKPYSVQVYEINPSLVSGFKKAFGSRLPKTDDLDAYIIAER LRFGHLTPYSHEVSVTAPLRQLTRLRLHLVELLVDEKNRALNLLFLKFSNYKQDNPFTNVFGRASIEVLKEFTPDEIAQI SIEELAEFIQSHGKNRFTNPEEIATALKQAANRAYRLNSKMEQACEIALSLTLQNIEHLKRQIKSLDKVISRELKAIPQT LTTVKGLGDVSAAGIIAEIGDIKRFKNEASLAQYAGLTCTRYQSGDFDAEERRLTKSGNKYLRYYLVMAANSLRVHNEEY KAYYQTKYQEVQKHQHKRALVLTARKLVRLVFALLSKGQIYKGAVKS
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41615; Mature: 41615
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDTLVSLATKSNVSQLNLGLEATSIFSIPLRDFLLDAPQLKPYSVQVYEINPSLVSGFKK CCCHHHHHHHCCHHHHCCCCCHHHEEECCHHHHHCCCCCCCCEEEEEEEECHHHHHHHHH AFGSRLPKTDDLDAYIIAERLRFGHLTPYSHEVSVTAPLRQLTRLRLHLVELLVDEKNRA HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCE LNLLFLKFSNYKQDNPFTNVFGRASIEVLKEFTPDEIAQISIEELAEFIQSHGKNRFTNP EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH EEIATALKQAANRAYRLNSKMEQACEIALSLTLQNIEHLKRQIKSLDKVISRELKAIPQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTVKGLGDVSAAGIIAEIGDIKRFKNEASLAQYAGLTCTRYQSGDFDAEERRLTKSGNK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHH YLRYYLVMAANSLRVHNEEYKAYYQTKYQEVQKHQHKRALVLTARKLVRLVFALLSKGQI HHHHHHHHHHCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YKGAVKS CCCCCCC >Mature Secondary Structure MDTLVSLATKSNVSQLNLGLEATSIFSIPLRDFLLDAPQLKPYSVQVYEINPSLVSGFKK CCCHHHHHHHCCHHHHCCCCCHHHEEECCHHHHHCCCCCCCCEEEEEEEECHHHHHHHHH AFGSRLPKTDDLDAYIIAERLRFGHLTPYSHEVSVTAPLRQLTRLRLHLVELLVDEKNRA HHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCCE LNLLFLKFSNYKQDNPFTNVFGRASIEVLKEFTPDEIAQISIEELAEFIQSHGKNRFTNP EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCH EEIATALKQAANRAYRLNSKMEQACEIALSLTLQNIEHLKRQIKSLDKVISRELKAIPQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTTVKGLGDVSAAGIIAEIGDIKRFKNEASLAQYAGLTCTRYQSGDFDAEERRLTKSGNK HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHCCHH YLRYYLVMAANSLRVHNEEYKAYYQTKYQEVQKHQHKRALVLTARKLVRLVFALLSKGQI HHHHHHHHHHCHHEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC YKGAVKS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA