| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is RfaG7 [H]
Identifier: 20807153
GI number: 20807153
Start: 664546
End: 665781
Strand: Direct
Name: RfaG7 [H]
Synonym: TTE0662
Alternate gene names: 20807153
Gene position: 664546-665781 (Clockwise)
Preceding gene: 20807152
Following gene: 20807154
Centisome position: 24.71
GC content: 31.88
Gene sequence:
>1236_bases TTGAGTGGTAAAAATATTTGGATATTAAATCATTACGCAATTAGTCCTGACATGGCAGGTGGAACACGACATTATGATTT TGGCAAAGAATTGGTTAAAAAGGGATTTACTGTAACAATATTCGCTTCGGGATTTGACCATGTTACAAAAAAACACCTAA AAGTTTCTGCGAAAGAATCGGTTAGAGAAGAAGTTTTTGATGGAGTAAGATTTGTATGGCTTAACACTTTTCCGTATACA AAAAATGATTGGCGAAGAGTAGTAAATATGATTTCTTATGCTTTTAGAGTTATTAAAGTCGCTAAAAAATTTGAAAAGCC TGATATCATAATAGGATCTTCTATGCATTTTTTTGCTCCTCTTGCAGGATGGTGGTTGTCTAGGAAATATAAAGCGAGGT TTATTTTTGAAGTCAGAGATTTATGGCCTCAGACAGCAATAGATATGGGAGCAATTAAAGAAAATTCGATCCTTGCTAAG TTGTTATATATATGGGAGAAATTTATGTATGAAAGAGCAGAAAAAATTATAGTATTATTACCTGATGCAAAAAGCTATAT AGCCAAAAGAGGGATGCCGGAACAAAAAATAGTATGGATACCGAACGGTGTAAATATAGAGAGGTTTGAAACGGATATCT CAATTGATGAAAACCTTGAGGTTTTTGAAGTATTCAAAAAATATAAAGACAAATTTAAAGTGGTATATGCAGGAGCTCAT GGACCTGCTAATGGTCTTGAAGTTGTGATAGAAACAGCGGAATTATTGAGAGATTATGAAGATATCCAGTTTATTTTAAT AGGAGATGGGGTAGGGAAAGAGAGTTTAATTGAAATGGCAAACAAAAAGAAATTAACTAATATTGTTTTTTTATCACCTA TTTCAAAGAAATTTATACCAACAGTGTTGAGAAAAGCTGATTTGTTGTTACATTCTCTAAAACATATGGATGTATTTAAA TATGGGATAAGTCCAAACAAGATATTTGATTACCTTGCAAGTGGTAGACCTATAATTTCCAACGTAAGTGCTTCAAAGGA GATAATAGAAGAAGCAAATGCTGGTATAATTGTTCCTCCAGAAAATCCCAAATTACTTGCGGAGGGGATATTAAAAATAA AAAATTTATCAGAAAAAGAGAGAAACCAAATGGGTTTAAATGGGAGAAAATATGTAGAGCAACATTACGATATAAAAAAA TTAACCGAAAAATTAATCAAAGAGTTAGAGTTATGA
Upstream 100 bases:
>100_bases GCCTTATGGAGATGGGAAGGCGGCAGAAAAAATAGTTAAGGTGTTAAGAAAATATCTGTTGTAAGGTAAGATTTAACATA ATGAGGTAAGGTGATAATCT
Downstream 100 bases:
>100_bases CTTTTACTTAAAATGTTAATGGCTAGTTTACTGTTAATGATATAGAGGCAACTAAGACAATTAAAAAGTTAGTCGAAGAT GAAAGCTTGAAAGCCAAAAT
Product: glycosyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 410
Protein sequence:
>411_residues MSGKNIWILNHYAISPDMAGGTRHYDFGKELVKKGFTVTIFASGFDHVTKKHLKVSAKESVREEVFDGVRFVWLNTFPYT KNDWRRVVNMISYAFRVIKVAKKFEKPDIIIGSSMHFFAPLAGWWLSRKYKARFIFEVRDLWPQTAIDMGAIKENSILAK LLYIWEKFMYERAEKIIVLLPDAKSYIAKRGMPEQKIVWIPNGVNIERFETDISIDENLEVFEVFKKYKDKFKVVYAGAH GPANGLEVVIETAELLRDYEDIQFILIGDGVGKESLIEMANKKKLTNIVFLSPISKKFIPTVLRKADLLLHSLKHMDVFK YGISPNKIFDYLASGRPIISNVSASKEIIEEANAGIIVPPENPKLLAEGILKIKNLSEKERNQMGLNGRKYVEQHYDIKK LTEKLIKELEL
Sequences:
>Translated_411_residues MSGKNIWILNHYAISPDMAGGTRHYDFGKELVKKGFTVTIFASGFDHVTKKHLKVSAKESVREEVFDGVRFVWLNTFPYT KNDWRRVVNMISYAFRVIKVAKKFEKPDIIIGSSMHFFAPLAGWWLSRKYKARFIFEVRDLWPQTAIDMGAIKENSILAK LLYIWEKFMYERAEKIIVLLPDAKSYIAKRGMPEQKIVWIPNGVNIERFETDISIDENLEVFEVFKKYKDKFKVVYAGAH GPANGLEVVIETAELLRDYEDIQFILIGDGVGKESLIEMANKKKLTNIVFLSPISKKFIPTVLRKADLLLHSLKHMDVFK YGISPNKIFDYLASGRPIISNVSASKEIIEEANAGIIVPPENPKLLAEGILKIKNLSEKERNQMGLNGRKYVEQHYDIKK LTEKLIKELEL >Mature_410_residues SGKNIWILNHYAISPDMAGGTRHYDFGKELVKKGFTVTIFASGFDHVTKKHLKVSAKESVREEVFDGVRFVWLNTFPYTK NDWRRVVNMISYAFRVIKVAKKFEKPDIIIGSSMHFFAPLAGWWLSRKYKARFIFEVRDLWPQTAIDMGAIKENSILAKL LYIWEKFMYERAEKIIVLLPDAKSYIAKRGMPEQKIVWIPNGVNIERFETDISIDENLEVFEVFKKYKDKFKVVYAGAHG PANGLEVVIETAELLRDYEDIQFILIGDGVGKESLIEMANKKKLTNIVFLSPISKKFIPTVLRKADLLLHSLKHMDVFKY GISPNKIFDYLASGRPIISNVSASKEIIEEANAGIIVPPENPKLLAEGILKIKNLSEKERNQMGLNGRKYVEQHYDIKKL TEKLIKELEL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788363, Length=358, Percent_Identity=24.3016759776536, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: NA
Molecular weight: Translated: 47311; Mature: 47180
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKNIWILNHYAISPDMAGGTRHYDFGKELVKKGFTVTIFASGFDHVTKKHLKVSAKES CCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH VREEVFDGVRFVWLNTFPYTKNDWRRVVNMISYAFRVIKVAKKFEKPDIIIGSSMHFFAP HHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH LAGWWLSRKYKARFIFEVRDLWPQTAIDMGAIKENSILAKLLYIWEKFMYERAEKIIVLL HHHHHHCCHHHHHEEEEHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEE PDAKSYIAKRGMPEQKIVWIPNGVNIERFETDISIDENLEVFEVFKKYKDKFKVVYAGAH CCHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC GPANGLEVVIETAELLRDYEDIQFILIGDGVGKESLIEMANKKKLTNIVFLSPISKKFIP CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCEEEEECCHHHHHHH TVLRKADLLLHSLKHMDVFKYGISPNKIFDYLASGRPIISNVSASKEIIEEANAGIIVPP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEECC ENPKLLAEGILKIKNLSEKERNQMGLNGRKYVEQHYDIKKLTEKLIKELEL CCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure SGKNIWILNHYAISPDMAGGTRHYDFGKELVKKGFTVTIFASGFDHVTKKHLKVSAKES CCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHH VREEVFDGVRFVWLNTFPYTKNDWRRVVNMISYAFRVIKVAKKFEKPDIIIGSSMHFFAP HHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHH LAGWWLSRKYKARFIFEVRDLWPQTAIDMGAIKENSILAKLLYIWEKFMYERAEKIIVLL HHHHHHCCHHHHHEEEEHHHCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEE PDAKSYIAKRGMPEQKIVWIPNGVNIERFETDISIDENLEVFEVFKKYKDKFKVVYAGAH CCHHHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCC GPANGLEVVIETAELLRDYEDIQFILIGDGVGKESLIEMANKKKLTNIVFLSPISKKFIP CCCCHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHHCEEEEECCHHHHHHH TVLRKADLLLHSLKHMDVFKYGISPNKIFDYLASGRPIISNVSASKEIIEEANAGIIVPP HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHCCCCEEECC ENPKLLAEGILKIKNLSEKERNQMGLNGRKYVEQHYDIKKLTEKLIKELEL CCCHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7815923; 8759852; 9097040; 9278503 [H]