| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20807150
Identifier: 20807150
GI number: 20807150
Start: 661220
End: 662158
Strand: Direct
Name: 20807150
Synonym: TTE0659
Alternate gene names: NA
Gene position: 661220-662158 (Clockwise)
Preceding gene: 20807149
Following gene: 20807151
Centisome position: 24.59
GC content: 33.12
Gene sequence:
>939_bases ATGAGGTATGTAAGGATATTATCAAAATACTTAAGAATACTTCTAGGGAAAAGTGCTTTACATGTTAACCAGGGAATTGG AAAAATTTACTCTAAAGAAGGGATAAAAGGGTATTATAATGATTTAACTTTAAAAGTTAATTGGCATGGTGAAACTGATA AAAGAGGTTTACCTATGAATGTCAAAATGGATGGGGAAAAGATTTATTTTCCTACTACTGTAATTCAATATGGTTTGGGC AATTACGATTTGTATTTGCTAACGAAGCAAGATATATATTTTGAGCAGTTTTGGAAATCAGTTAATTGGGTTGTGAATGA GCAAGATGAATTGGGAGGATGGGATGTATTTGAAAGGATTGGAAGTAAAAAATTTTACAAATATTCAGCAATGACTCAAG GAGAAGGAGCATCTCTATTGATAAGAGCTTTTCAGGAAAGTGGCGATGAAGAATTTGTGGATAGAGCTAAAAAAGCGATA GATTTAATGTTGCTTCCTGTGGAAAAAGGTGGCACTGCGAGATACGTTAATGATAAGTTATTTTTGGAAGAAGTGGTCGA ATCAAAGCCTGTATTGATATTAAATGGCTGGATATTTGCCGTTTTTGGCTTATACGATATATTCAAGGCGACTTCTGATG GTAGATACAAGGAAGCGTTGCAAAGAACGTTGGATACCTTGAAAGATGAGTTGTACAAATATGACACAGGATATTGGAGT TATTACGATCAGTGTGGTAATCTTGCGAGTCCATTTTATCATAAGTTGCATATAGCTTTGCTTGAAGTTTTATATGAGCT TTTTAATACGATTGAGTTTAAAACAGTAAAAGAGAAATGGGAATCATATTTATCAAACAAATTTAAAAGAACTAGGGCTT TTATTGTAAAGGCATATCAAAAAATAAAGGAACCCGGAGAGGTTGTATTAATTAAGTAG
Upstream 100 bases:
>100_bases TTGCTGAGAAAGAGTTTGATATTAGTGTAATGGTAAAAAAGTATGAAAAATTGTATGAAAGTTTATTGCAATTTAAGTTG AAAAAGGGAGCTTCTTTATT
Downstream 100 bases:
>100_bases AGGAGAGTTGATATGAAAGGGATGAAGATAGCATATATCACGTCGCAGACACCTTATGGGAAAGGTGAACAATTTATACT TCCAGAGATTTTAGAAGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRYVRILSKYLRILLGKSALHVNQGIGKIYSKEGIKGYYNDLTLKVNWHGETDKRGLPMNVKMDGEKIYFPTTVIQYGLG NYDLYLLTKQDIYFEQFWKSVNWVVNEQDELGGWDVFERIGSKKFYKYSAMTQGEGASLLIRAFQESGDEEFVDRAKKAI DLMLLPVEKGGTARYVNDKLFLEEVVESKPVLILNGWIFAVFGLYDIFKATSDGRYKEALQRTLDTLKDELYKYDTGYWS YYDQCGNLASPFYHKLHIALLEVLYELFNTIEFKTVKEKWESYLSNKFKRTRAFIVKAYQKIKEPGEVVLIK
Sequences:
>Translated_312_residues MRYVRILSKYLRILLGKSALHVNQGIGKIYSKEGIKGYYNDLTLKVNWHGETDKRGLPMNVKMDGEKIYFPTTVIQYGLG NYDLYLLTKQDIYFEQFWKSVNWVVNEQDELGGWDVFERIGSKKFYKYSAMTQGEGASLLIRAFQESGDEEFVDRAKKAI DLMLLPVEKGGTARYVNDKLFLEEVVESKPVLILNGWIFAVFGLYDIFKATSDGRYKEALQRTLDTLKDELYKYDTGYWS YYDQCGNLASPFYHKLHIALLEVLYELFNTIEFKTVKEKWESYLSNKFKRTRAFIVKAYQKIKEPGEVVLIK >Mature_312_residues MRYVRILSKYLRILLGKSALHVNQGIGKIYSKEGIKGYYNDLTLKVNWHGETDKRGLPMNVKMDGEKIYFPTTVIQYGLG NYDLYLLTKQDIYFEQFWKSVNWVVNEQDELGGWDVFERIGSKKFYKYSAMTQGEGASLLIRAFQESGDEEFVDRAKKAI DLMLLPVEKGGTARYVNDKLFLEEVVESKPVLILNGWIFAVFGLYDIFKATSDGRYKEALQRTLDTLKDELYKYDTGYWS YYDQCGNLASPFYHKLHIALLEVLYELFNTIEFKTVKEKWESYLSNKFKRTRAFIVKAYQKIKEPGEVVLIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI51317380, Length=209, Percent_Identity=31.5789473684211, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71980724, Length=223, Percent_Identity=27.8026905829596, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21687054, Length=226, Percent_Identity=30.0884955752212, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI281360211, Length=226, Percent_Identity=30.0884955752212, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010598 [H]
Pfam domain/function: PF06662 C5-epim_C [H]
EC number: NA
Molecular weight: Translated: 36484; Mature: 36484
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYVRILSKYLRILLGKSALHVNQGIGKIYSKEGIKGYYNDLTLKVNWHGETDKRGLPMN CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCCCCCCCEE VKMDGEKIYFPTTVIQYGLGNYDLYLLTKQDIYFEQFWKSVNWVVNEQDELGGWDVFERI EEECCCEEEECHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCEECCCCCCCCHHHHHHH GSKKFYKYSAMTQGEGASLLIRAFQESGDEEFVDRAKKAIDLMLLPVEKGGTARYVNDKL CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCCCEEEECHHH FLEEVVESKPVLILNGWIFAVFGLYDIFKATSDGRYKEALQRTLDTLKDELYKYDTGYWS HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH YYDQCGNLASPFYHKLHIALLEVLYELFNTIEFKTVKEKWESYLSNKFKRTRAFIVKAYQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKEPGEVVLIK HHCCCCCEEEEC >Mature Secondary Structure MRYVRILSKYLRILLGKSALHVNQGIGKIYSKEGIKGYYNDLTLKVNWHGETDKRGLPMN CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEECCCEEEEEEECCCCCCCCCCEE VKMDGEKIYFPTTVIQYGLGNYDLYLLTKQDIYFEQFWKSVNWVVNEQDELGGWDVFERI EEECCCEEEECHHHHHHCCCCEEEEEEECCCHHHHHHHHHHCCEECCCCCCCCHHHHHHH GSKKFYKYSAMTQGEGASLLIRAFQESGDEEFVDRAKKAIDLMLLPVEKGGTARYVNDKL CCCCEEEEECCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEEECCCCCEEEECHHH FLEEVVESKPVLILNGWIFAVFGLYDIFKATSDGRYKEALQRTLDTLKDELYKYDTGYWS HHHHHHCCCCEEEECHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHH YYDQCGNLASPFYHKLHIALLEVLYELFNTIEFKTVKEKWESYLSNKFKRTRAFIVKAYQ HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIKEPGEVVLIK HHCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]