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The map label for this gene is RfaG5 [H]

Identifier: 20807149

GI number: 20807149

Start: 660081

End: 661223

Strand: Direct

Name: RfaG5 [H]

Synonym: TTE0658

Alternate gene names: 20807149

Gene position: 660081-661223 (Clockwise)

Preceding gene: 20807148

Following gene: 20807150

Centisome position: 24.54

GC content: 32.81

Gene sequence:

>1143_bases
ATGAATAGAATTAAGGTACTTCAAATAATACCTAATTTTGGTTATGGTGGAGCAGAACGCTTAACAGTAAATCTAATGAA
ATATTTAGATAAAGAAAAGTACGAAGTAAGAGCTATTAGTATGTTCGATTCGTTAAATACGGAACTAGAGAAAATATTAG
AAAATGAAAATATACCAGTTTATTACCTGGGGAAGAAAAAAGGATTTGATCCAAGGATGTTTTTTAGAATTGATAAAATA
ATAAAATCTTTTAAACCTCATATTGTTCATACCCACCGGTATGTTCTTAGATATGCATTGCCTTCTCTGTTGCTTCATAA
GGTACCTGTAAAAGTTCATACTGTTCATAATATTGCTGAAAAGGAAGTTGACAAAGTTGGCAAATTGGTTCATAAAATTG
CTTTTTCTTTTGGGGTGATCCCAATTTCCATATCAAGATTAGTTAGTGAAAGTTTGACTTCTGTTTATGGGGTTAAAAAC
ATTCCATTAATTTTAAATGGTATACCTGTTGAATATTATCAAAAGGCTAATATAAACCGGGAAGAGTGGAGAGAAAAAGA
AGGCTTTCAAAAGGAAGATTTTTTGTTTGTGAATATAGCAAGATTAGCGCCGCAAAAGAATCAAGCGTTACTTATAGAAG
CATTTGCAAAAGGTCCTGCGAGACATGATAATTCCAAGCTAATTATTGTAGGAGATGGAGAAGAGCGTGAAAGGCTTGAA
GAGATAACTAAATTGCATAGACTTGAAGAAAAAGTTTATTTCCTTGGGATAAGGACGGATATTCCAGATATTTTAAATGC
TTCTGATGTGTTTGTTTTATCTTCAGATTGGGAAGGCAATCCACTAAGTGTTATGGAAGCAATGGCTGCTGGAAAACCGG
TGATAGCAACGTCAGTAGGAGGAGTTCCAGAGTTAATACAGAATAATATTACAGGAATTCTTGTTCCCCCAAAGAATGTA
AACGCTTTTTCTAAAGCAATGCTGATGTTAATTGAGAACAAAGATTTATGTCAGAAGTTAGGAGAAAAGGCTAAGGAAGT
TGCTGAGAAAGAGTTTGATATTAGTGTAATGGTAAAAAAGTATGAAAAATTGTATGAAAGTTTATTGCAATTTAAGTTGA
AAAAGGGAGCTTCTTTATTATGA

Upstream 100 bases:

>100_bases
GATGGAGTTTATCTTATTTTTCCCACTATAGTTTTTTTGATGTTGTATTTGTTATTAAACTTCAAAAAATATTCCTTTTA
AAAATGTAGAGGAGGTAATT

Downstream 100 bases:

>100_bases
GGTATGTAAGGATATTATCAAAATACTTAAGAATACTTCTAGGGAAAAGTGCTTTACATGTTAACCAGGGAATTGGAAAA
ATTTACTCTAAAGAAGGGAT

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MNRIKVLQIIPNFGYGGAERLTVNLMKYLDKEKYEVRAISMFDSLNTELEKILENENIPVYYLGKKKGFDPRMFFRIDKI
IKSFKPHIVHTHRYVLRYALPSLLLHKVPVKVHTVHNIAEKEVDKVGKLVHKIAFSFGVIPISISRLVSESLTSVYGVKN
IPLILNGIPVEYYQKANINREEWREKEGFQKEDFLFVNIARLAPQKNQALLIEAFAKGPARHDNSKLIIVGDGEERERLE
EITKLHRLEEKVYFLGIRTDIPDILNASDVFVLSSDWEGNPLSVMEAMAAGKPVIATSVGGVPELIQNNITGILVPPKNV
NAFSKAMLMLIENKDLCQKLGEKAKEVAEKEFDISVMVKKYEKLYESLLQFKLKKGASLL

Sequences:

>Translated_380_residues
MNRIKVLQIIPNFGYGGAERLTVNLMKYLDKEKYEVRAISMFDSLNTELEKILENENIPVYYLGKKKGFDPRMFFRIDKI
IKSFKPHIVHTHRYVLRYALPSLLLHKVPVKVHTVHNIAEKEVDKVGKLVHKIAFSFGVIPISISRLVSESLTSVYGVKN
IPLILNGIPVEYYQKANINREEWREKEGFQKEDFLFVNIARLAPQKNQALLIEAFAKGPARHDNSKLIIVGDGEERERLE
EITKLHRLEEKVYFLGIRTDIPDILNASDVFVLSSDWEGNPLSVMEAMAAGKPVIATSVGGVPELIQNNITGILVPPKNV
NAFSKAMLMLIENKDLCQKLGEKAKEVAEKEFDISVMVKKYEKLYESLLQFKLKKGASLL
>Mature_380_residues
MNRIKVLQIIPNFGYGGAERLTVNLMKYLDKEKYEVRAISMFDSLNTELEKILENENIPVYYLGKKKGFDPRMFFRIDKI
IKSFKPHIVHTHRYVLRYALPSLLLHKVPVKVHTVHNIAEKEVDKVGKLVHKIAFSFGVIPISISRLVSESLTSVYGVKN
IPLILNGIPVEYYQKANINREEWREKEGFQKEDFLFVNIARLAPQKNQALLIEAFAKGPARHDNSKLIIVGDGEERERLE
EITKLHRLEEKVYFLGIRTDIPDILNASDVFVLSSDWEGNPLSVMEAMAAGKPVIATSVGGVPELIQNNITGILVPPKNV
NAFSKAMLMLIENKDLCQKLGEKAKEVAEKEFDISVMVKKYEKLYESLLQFKLKKGASLL

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

Organism=Escherichia coli, GI1788357, Length=181, Percent_Identity=28.7292817679558, Blast_Score=71, Evalue=9e-14,
Organism=Caenorhabditis elegans, GI17532709, Length=124, Percent_Identity=34.6774193548387, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI32564184, Length=418, Percent_Identity=22.7272727272727, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI9755344, Length=181, Percent_Identity=24.8618784530387, Blast_Score=65, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR016040 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 43304; Mature: 43304

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIKVLQIIPNFGYGGAERLTVNLMKYLDKEKYEVRAISMFDSLNTELEKILENENIPV
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
YYLGKKKGFDPRMFFRIDKIIKSFKPHIVHTHRYVLRYALPSLLLHKVPVKVHTVHNIAE
EEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
KEVDKVGKLVHKIAFSFGVIPISISRLVSESLTSVYGVKNIPLILNGIPVEYYQKANINR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCH
EEWREKEGFQKEDFLFVNIARLAPQKNQALLIEAFAKGPARHDNSKLIIVGDGEERERLE
HHHHHHCCCCCCCEEEEEHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEECCHHHHHHH
EITKLHRLEEKVYFLGIRTDIPDILNASDVFVLSSDWEGNPLSVMEAMAAGKPVIATSVG
HHHHHHHHHHHEEEEEECCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
GVPELIQNNITGILVPPKNVNAFSKAMLMLIENKDLCQKLGEKAKEVAEKEFDISVMVKK
CCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
YEKLYESLLQFKLKKGASLL
HHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNRIKVLQIIPNFGYGGAERLTVNLMKYLDKEKYEVRAISMFDSLNTELEKILENENIPV
CCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
YYLGKKKGFDPRMFFRIDKIIKSFKPHIVHTHRYVLRYALPSLLLHKVPVKVHTVHNIAE
EEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHH
KEVDKVGKLVHKIAFSFGVIPISISRLVSESLTSVYGVKNIPLILNGIPVEYYQKANINR
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCCCH
EEWREKEGFQKEDFLFVNIARLAPQKNQALLIEAFAKGPARHDNSKLIIVGDGEERERLE
HHHHHHCCCCCCCEEEEEHHHHCCCCCCEEEEEEHHCCCCCCCCCEEEEEECCHHHHHHH
EITKLHRLEEKVYFLGIRTDIPDILNASDVFVLSSDWEGNPLSVMEAMAAGKPVIATSVG
HHHHHHHHHHHEEEEEECCCCHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCC
GVPELIQNNITGILVPPKNVNAFSKAMLMLIENKDLCQKLGEKAKEVAEKEFDISVMVKK
CCHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH
YEKLYESLLQFKLKKGASLL
HHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]