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The map label for this gene is AtpC

Identifier: 20807131

GI number: 20807131

Start: 641707

End: 642123

Strand: Direct

Name: AtpC

Synonym: TTE0638

Alternate gene names: 20807131

Gene position: 641707-642123 (Clockwise)

Preceding gene: 20807130

Following gene: 20807137

Centisome position: 23.86

GC content: 43.65

Gene sequence:

>417_bases
ATGGATAAAACCTTTCACCTCGAAGTATTGACCCCTTACAGAAAGTTTTATGAAGGGGATGTGGAAGAGATAATTGTGAC
TACTACCACAGGTCAGATTGGCATTTTGAAAGACCACATTCCTCTTACAACTCCCATCGCTCAGGCTGGCACTTTGCAGA
TAAAAAAAGATGGTCAATGGAAAGAAGCTTTCATCTCTGGAGGCTTCATGGAAGTGAGAAGAGATGGAGTTACAATACTC
TCAAGTGCTGCAGAATGGCCGGAAGAAATAGATATAGCAAGAGCTCAAGCAGCCAAGGAGAGGGCAGAAGAAAAACTGCG
CCAGAAAAAGAGCAAACAGGAGTACATTGCTGCAGAAGCGGCTTTGAAGAGGGCATTGATGAGGCTTAAAATCGCAAGCA
AATACCAGGAAATGTGA

Upstream 100 bases:

>100_bases
GAGGGAGAAATGGACGACATACCAGAGCCAGCCTTTTACATGGTAGGAACGATCGATGAAGTTTATGAGAAAGCAGAGAA
GATGAAATGAGGTGAAATAA

Downstream 100 bases:

>100_bases
AAGCTTCCCTCAAAAGAGGGAAGCTTTTTATCTTTTCTCAGGTTCTTTTTCAGGTAGTTCAGATAAGATTATTCCTGCCA
GCATGAAAGCTCCTCCGATG

Product: F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit)

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MDKTFHLEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQWKEAFISGGFMEVRRDGVTIL
SSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQEYIAAEAALKRALMRLKIASKYQEM

Sequences:

>Translated_138_residues
MDKTFHLEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQWKEAFISGGFMEVRRDGVTIL
SSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQEYIAAEAALKRALMRLKIASKYQEM
>Mature_138_residues
MDKTFHLEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQWKEAFISGGFMEVRRDGVTIL
SSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQEYIAAEAALKRALMRLKIASKYQEM

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family

Homologues:

Organism=Escherichia coli, GI1790169, Length=131, Percent_Identity=34.3511450381679, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPE_THETN (Q8RC14)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_622302.1
- ProteinModelPortal:   Q8RC14
- SMR:   Q8RC14
- GeneID:   996576
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE0638
- NMPDR:   fig|273068.3.peg.313
- HOGENOM:   HBG663981
- OMA:   ARAELME
- ProtClustDB:   CLSK2754722
- BioCyc:   TTEN273068:TTE0638-MONOMER
- BRENDA:   3.6.3.14
- HAMAP:   MF_00530
- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- Gene3D:   G3DSA:1.20.5.440
- Gene3D:   G3DSA:2.60.15.10
- PANTHER:   PTHR13822
- ProDom:   PD000944
- TIGRFAMs:   TIGR01216

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N; SSF46604 ATPsynt_DE; SSF51344 ATPsynt_DE

EC number: 3.6.3.14

Molecular weight: Translated: 15654; Mature: 15654

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKTFHLEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQW
CCCEEEEEEECHHHHHHCCCHHHEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCH
KEAFISGGFMEVRRDGVTILSSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQEYIAAEA
HHHHHCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRALMRLKIASKYQEM
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDKTFHLEVLTPYRKFYEGDVEEIIVTTTTGQIGILKDHIPLTTPIAQAGTLQIKKDGQW
CCCEEEEEEECHHHHHHCCCHHHEEEEECCCCEEEEECCCCCCCCCCCCCEEEEECCCCH
KEAFISGGFMEVRRDGVTILSSAAEWPEEIDIARAQAAKERAEEKLRQKKSKQEYIAAEA
HHHHHCCCHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALKRALMRLKIASKYQEM
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11997336