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The map label for this gene is 20807082

Identifier: 20807082

GI number: 20807082

Start: 588537

End: 589130

Strand: Direct

Name: 20807082

Synonym: TTE0586

Alternate gene names: NA

Gene position: 588537-589130 (Clockwise)

Preceding gene: 20807081

Following gene: 20807083

Centisome position: 21.88

GC content: 33.33

Gene sequence:

>594_bases
ATGTTATTAAGTATGCAAAAAGTAAGAGAAATATACTCGATTAGTCGAAGGACACTTATAAACTGGGAAAAGGAAGGATT
AATTACTCCTGTTAGAACTCCAAGAGGTATAAGAAGGTATAGAAAAGAAGACATAGAGAAGTTATTAGGTATGATAGAAG
AAAAACCAAAACCCAAAGTAGTTTTGTATGCAAGAGTATCCACAAAAAAACAGGAAGAATATCTTAGGAATCAAATTAGA
AGGCTTGAAGAATACGCTAATTCCCAGGGATGGCAGTATGAAGTTATACATGAGATAGCAAGTGGAGTAAATGAAGATAG
AAGAGGCTTATTAAAGCTTTTGAACAAGATAAAAAGAGGAGAAGTTGAAAAAGTTGTAATAGAATATCCAGACAGACTTG
CGAGATTCGGCTTTGAATATCTTAAATTTTTCATGGAAAGTTTTGGAGTAGAGCTTATAGTTTTAAACGGGAAAGAAAAC
GAAGAAGATGTAAATAAAGAACTAGCAGAGGACTTAATAGCAATAGTAACATCTTTCGCAGCAAGAATTTATGGGAAAAG
AGGTGGCAAAAAGCGTGATAGTAATACAGACTAA

Upstream 100 bases:

>100_bases
GGAGAAAATGGCGGAGGAAGTGTTAAATAATTAATATTGGAGGTTATAGCAGTTGACGATAATCATGCAAAGAGGTATAA
TTTTAATTAGGTGATAATAA

Downstream 100 bases:

>100_bases
GCTCATTTTTCTAGATCAAGAAGACAAACAAATAGTATTAGACTTAATGAGAAGATGGTCATCCTGCATGAGATACGCAT
ACAAAAGGCTTTTAGAAGGT

Product: site-specific integrase-resolvase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLLSMQKVREIYSISRRTLINWEKEGLITPVRTPRGIRRYRKEDIEKLLGMIEEKPKPKVVLYARVSTKKQEEYLRNQIR
RLEEYANSQGWQYEVIHEIASGVNEDRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDVNKELAEDLIAIVTSFAARIYGKRGGKKRDSNTD

Sequences:

>Translated_197_residues
MLLSMQKVREIYSISRRTLINWEKEGLITPVRTPRGIRRYRKEDIEKLLGMIEEKPKPKVVLYARVSTKKQEEYLRNQIR
RLEEYANSQGWQYEVIHEIASGVNEDRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDVNKELAEDLIAIVTSFAARIYGKRGGKKRDSNTD
>Mature_197_residues
MLLSMQKVREIYSISRRTLINWEKEGLITPVRTPRGIRRYRKEDIEKLLGMIEEKPKPKVVLYARVSTKKQEEYLRNQIR
RLEEYANSQGWQYEVIHEIASGVNEDRRGLLKLLNKIKRGEVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKEN
EEDVNKELAEDLIAIVTSFAARIYGKRGGKKRDSNTD

Specific function: Unknown

COG id: COG2452

COG function: function code L; Predicted site-specific integrase-resolvase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551
- InterPro:   IPR006119
- InterPro:   IPR010093 [H]

Pfam domain/function: PF00376 MerR; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23199; Mature: 23199

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50937 HTH_MERR_2 ; PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLSMQKVREIYSISRRTLINWEKEGLITPVRTPRGIRRYRKEDIEKLLGMIEEKPKPKV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
VLYARVSTKKQEEYLRNQIRRLEEYANSQGWQYEVIHEIASGVNEDRRGLLKLLNKIKRG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
EVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKENEEDVNKELAEDLIAIVTSFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
ARIYGKRGGKKRDSNTD
HHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLLSMQKVREIYSISRRTLINWEKEGLITPVRTPRGIRRYRKEDIEKLLGMIEEKPKPKV
CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCE
VLYARVSTKKQEEYLRNQIRRLEEYANSQGWQYEVIHEIASGVNEDRRGLLKLLNKIKRG
EEEEECCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHC
EVEKVVIEYPDRLARFGFEYLKFFMESFGVELIVLNGKENEEDVNKELAEDLIAIVTSFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
ARIYGKRGGKKRDSNTD
HHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]