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The map label for this gene is UbiB

Identifier: 20807066

GI number: 20807066

Start: 570132

End: 570983

Strand: Direct

Name: UbiB

Synonym: TTE0566

Alternate gene names: NA

Gene position: 570132-570983 (Clockwise)

Preceding gene: 20807065

Following gene: 20807067

Centisome position: 21.2

GC content: 39.67

Gene sequence:

>852_bases
ATGTACAGAATTGTGAGAAAGGAAGTATTAAATCCTGCTGTTAAGCTCATGGATATTGAGGCGCCTAGAGTTGCAAAAAG
TGCAAAACCGGGGCAATTTGTAATTTTAAGAATTTACGAAAAAGGAGAAAGAATTCCCCTCACTATTGCAGATTACGACC
CAGAAAAAGGCACTGTAACCATTGTATTTCAAGAAGTTGGTAAATCCACCAAGCTTTTGGGCACTTTAAATGAAGGAGAT
TATATAGCGGATTTTGTAGGACCTCTGGGCAATACGATGGAAGTTCCTAAAGGGGCAAAGAAAATTTTGGGGGTAGGAGG
AGGAGTCGGCATACCTGCCCTTTATCCGAAACTTAAGATGCTTCATCAGGAAGGATACAGAGTAGAAGCAATTTTAGGAG
GAAGAAGCGAGGAGTATGTGATTTTTAGGAAAGAAATGGAGGCAGTGTGTGACAAAGTATATTATGCTACAGATGATGGA
ACACTTGGTAAGAAAGGATTTGTAACAGATGTTTTGAAAGATGTCCTTGAAAATGACAAAGAAGTGGACTTTGTGATTAC
TGTAGGTCCTGTGATAATGATGAAAAATGTCTGCAAGATGACTAAAGAATACGATATACCTACTATTGTAAGCATGAATC
CCCTGATGGTGGACGGGACAGGAATGTGCGGAGCCTGCAGAATTGAAGTGGGAGGAGAAACTAAATTTGTCTGCATGGAT
GGTCCAATTTTTGATGGTCATCTTGTAAATTTTGATTTAGCTATGACAAGGCTTAATATGTTCAAGAAGCAGGAAAAGAT
TTCATTAGAGCTGTATGAGAAGGAACATGGAGGTGGTCACCATGGCCGTTAA

Upstream 100 bases:

>100_bases
GACAAGTGGAGCGCATGACGGCTTTAAATGTCCTTCGGATAAATATTTACGTCAAAAGCCTATACGTCACTAAAAATAAA
TGAGGAAAAGGGTGTTGAGG

Downstream 100 bases:

>100_bases
GGATAGAGTACCTATGAGAGAACAGGACCCGAAAGTGAGGATAAAGAATTTTGATGAGGTAGCGCTAGGTTATACTGAAG
AAGAAGCTATCTTAGAGGCT

Product: ferredoxin-NADP(+) reductase subunit alpha

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MYRIVRKEVLNPAVKLMDIEAPRVAKSAKPGQFVILRIYEKGERIPLTIADYDPEKGTVTIVFQEVGKSTKLLGTLNEGD
YIADFVGPLGNTMEVPKGAKKILGVGGGVGIPALYPKLKMLHQEGYRVEAILGGRSEEYVIFRKEMEAVCDKVYYATDDG
TLGKKGFVTDVLKDVLENDKEVDFVITVGPVIMMKNVCKMTKEYDIPTIVSMNPLMVDGTGMCGACRIEVGGETKFVCMD
GPIFDGHLVNFDLAMTRLNMFKKQEKISLELYEKEHGGGHHGR

Sequences:

>Translated_283_residues
MYRIVRKEVLNPAVKLMDIEAPRVAKSAKPGQFVILRIYEKGERIPLTIADYDPEKGTVTIVFQEVGKSTKLLGTLNEGD
YIADFVGPLGNTMEVPKGAKKILGVGGGVGIPALYPKLKMLHQEGYRVEAILGGRSEEYVIFRKEMEAVCDKVYYATDDG
TLGKKGFVTDVLKDVLENDKEVDFVITVGPVIMMKNVCKMTKEYDIPTIVSMNPLMVDGTGMCGACRIEVGGETKFVCMD
GPIFDGHLVNFDLAMTRLNMFKKQEKISLELYEKEHGGGHHGR
>Mature_283_residues
MYRIVRKEVLNPAVKLMDIEAPRVAKSAKPGQFVILRIYEKGERIPLTIADYDPEKGTVTIVFQEVGKSTKLLGTLNEGD
YIADFVGPLGNTMEVPKGAKKILGVGGGVGIPALYPKLKMLHQEGYRVEAILGGRSEEYVIFRKEMEAVCDKVYYATDDG
TLGKKGFVTDVLKDVLENDKEVDFVITVGPVIMMKNVCKMTKEYDIPTIVSMNPLMVDGTGMCGACRIEVGGETKFVCMD
GPIFDGHLVNFDLAMTRLNMFKKQEKISLELYEKEHGGGHHGR

Specific function: Unknown

COG id: COG0543

COG function: function code HC; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012165
- InterPro:   IPR019480
- InterPro:   IPR017927
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF10418 DHODB_Fe-S_bind; PF00970 FAD_binding_6; PF00175 NAD_binding_1 [H]

EC number: NA

Molecular weight: Translated: 31332; Mature: 31332

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYRIVRKEVLNPAVKLMDIEAPRVAKSAKPGQFVILRIYEKGERIPLTIADYDPEKGTVT
CCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEE
IVFQEVGKSTKLLGTLNEGDYIADFVGPLGNTMEVPKGAKKILGVGGGVGIPALYPKLKM
EEEHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHH
LHQEGYRVEAILGGRSEEYVIFRKEMEAVCDKVYYATDDGTLGKKGFVTDVLKDVLENDK
HHHCCCEEEEEECCCCCCEEEEHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCC
EVDFVITVGPVIMMKNVCKMTKEYDIPTIVSMNPLMVDGTGMCGACRIEVGGETKFVCMD
CEEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEEEECCCEEEEEEC
GPIFDGHLVNFDLAMTRLNMFKKQEKISLELYEKEHGGGHHGR
CCEECCEEEEHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MYRIVRKEVLNPAVKLMDIEAPRVAKSAKPGQFVILRIYEKGERIPLTIADYDPEKGTVT
CCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCEEE
IVFQEVGKSTKLLGTLNEGDYIADFVGPLGNTMEVPKGAKKILGVGGGVGIPALYPKLKM
EEEHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCCCCCHHHHEECCCCCCCCHHHHHHHH
LHQEGYRVEAILGGRSEEYVIFRKEMEAVCDKVYYATDDGTLGKKGFVTDVLKDVLENDK
HHHCCCEEEEEECCCCCCEEEEHHHHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHCCCC
EVDFVITVGPVIMMKNVCKMTKEYDIPTIVSMNPLMVDGTGMCGACRIEVGGETKFVCMD
CEEEEEEECHHHHHHHHHHHHHCCCCCEEEECCCEEEECCCCCEEEEEEECCCEEEEEEC
GPIFDGHLVNFDLAMTRLNMFKKQEKISLELYEKEHGGGHHGR
CCEECCEEEEHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA