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The map label for this gene is ydiC [H]

Identifier: 20807037

GI number: 20807037

Start: 542871

End: 543563

Strand: Direct

Name: ydiC [H]

Synonym: TTE0536

Alternate gene names: 20807037

Gene position: 542871-543563 (Clockwise)

Preceding gene: 20807036

Following gene: 20807038

Centisome position: 20.19

GC content: 38.53

Gene sequence:

>693_bases
ATGAAGGTTTTGGCAATTGAGTCTTCTTCCAGGACGGCTGGAGTGGCATTGGTGGATGATAACGGGATAGTTGGCGAGTA
TTCAATAAACTACCTTAAGCATTCTGTAATTTTGATGCCAATGATAGATGAACTTTTAAAAAGGTGCGGTGTTTCAATAA
GAGACATCACTCATATAGCTGTCTCTGAAGGACCAGGATCTTTTACAGGTTTAAGAATTGGAGCAGCAACAGCAAAGGGA
TTGGCTCATGCACTTAACATCCCTGTGGTAGGAGTGTCTTCTCTTCTGTCTTTAGCATACAATGTTAGTGAGTTTGATGG
ATTGATTTGCCCAATACTGGATGCTTTAAATGGGCAGGTATACGGAATGCTGGTTAGGGGAAAAGATTTTGAGGTGATTG
AAAAGCAAGATGTCTATTCCATAGAAGAGATTTCTAAGATTGTTGAGAATTATTCCGATAAAGTTTTATTTGTGGGAGAA
GGAGTAAACGTCTATAAGGATAGTATCTATGAAATATTGGGAGATAGAGTTTTATTTGCTAAGGATAAAGACAACATGGC
AAGGGCTTCTTCTTTAGGAGAGATCGCTGTCTTAAAGATAAAGAAAAACGAAATAATAAACTTTTTCGATTTTAAGCCTG
TTTATATAAGGAAGTCTGCTGCGGAGATTCGATTTGGGGGCGAGGGGAGTTAA

Upstream 100 bases:

>100_bases
TAGAAGTGCTCATTGAAAAAGGTGAAGAGGAGGATTTGAGAATTATAACTTTAAACGCTTTTGGGAAAAGATATGAAGAA
CTGCTAAAGGAGATGGATTG

Downstream 100 bases:

>100_bases
TTGATGGAAGTTATTATAAGGCCGATGACAGAAGATGATATAGATGAAGTGATGGAGATAGAGAAGTTGAGTTTTACTAC
ACCATGGTCTAGAGAAGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKVLAIESSSRTAGVALVDDNGIVGEYSINYLKHSVILMPMIDELLKRCGVSIRDITHIAVSEGPGSFTGLRIGAATAKG
LAHALNIPVVGVSSLLSLAYNVSEFDGLICPILDALNGQVYGMLVRGKDFEVIEKQDVYSIEEISKIVENYSDKVLFVGE
GVNVYKDSIYEILGDRVLFAKDKDNMARASSLGEIAVLKIKKNEIINFFDFKPVYIRKSAAEIRFGGEGS

Sequences:

>Translated_230_residues
MKVLAIESSSRTAGVALVDDNGIVGEYSINYLKHSVILMPMIDELLKRCGVSIRDITHIAVSEGPGSFTGLRIGAATAKG
LAHALNIPVVGVSSLLSLAYNVSEFDGLICPILDALNGQVYGMLVRGKDFEVIEKQDVYSIEEISKIVENYSDKVLFVGE
GVNVYKDSIYEILGDRVLFAKDKDNMARASSLGEIAVLKIKKNEIINFFDFKPVYIRKSAAEIRFGGEGS
>Mature_230_residues
MKVLAIESSSRTAGVALVDDNGIVGEYSINYLKHSVILMPMIDELLKRCGVSIRDITHIAVSEGPGSFTGLRIGAATAKG
LAHALNIPVVGVSSLLSLAYNVSEFDGLICPILDALNGQVYGMLVRGKDFEVIEKQDVYSIEEISKIVENYSDKVLFVGE
GVNVYKDSIYEILGDRVLFAKDKDNMARASSLGEIAVLKIKKNEIINFFDFKPVYIRKSAAEIRFGGEGS

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M22 family [H]

Homologues:

Organism=Escherichia coli, GI1788109, Length=242, Percent_Identity=26.8595041322314, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 25026; Mature: 25026

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLAIESSSRTAGVALVDDNGIVGEYSINYLKHSVILMPMIDELLKRCGVSIRDITHIA
CEEEEEECCCCCCEEEEEECCCEEEEEEHHHHHHHEEHHHHHHHHHHHHCCCCHHEEEEE
VSEGPGSFTGLRIGAATAKGLAHALNIPVVGVSSLLSLAYNVSEFDGLICPILDALNGQV
EECCCCCEEEEEEEHHHHHHHHHHHCCCEECHHHHHHHHHCHHHHCCHHHHHHHHCCCEE
YGMLVRGKDFEVIEKQDVYSIEEISKIVENYSDKVLFVGEGVNVYKDSIYEILGDRVLFA
EEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEE
KDKDNMARASSLGEIAVLKIKKNEIINFFDFKPVYIRKSAAEIRFGGEGS
ECCCCHHHHCCCCCEEEEEEECCCEEEEECCCEEEEECCCEEEEECCCCC
>Mature Secondary Structure
MKVLAIESSSRTAGVALVDDNGIVGEYSINYLKHSVILMPMIDELLKRCGVSIRDITHIA
CEEEEEECCCCCCEEEEEECCCEEEEEEHHHHHHHEEHHHHHHHHHHHHCCCCHHEEEEE
VSEGPGSFTGLRIGAATAKGLAHALNIPVVGVSSLLSLAYNVSEFDGLICPILDALNGQV
EECCCCCEEEEEEEHHHHHHHHHHHCCCEECHHHHHHHHHCHHHHCCHHHHHHHHCCCEE
YGMLVRGKDFEVIEKQDVYSIEEISKIVENYSDKVLFVGEGVNVYKDSIYEILGDRVLFA
EEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEE
KDKDNMARASSLGEIAVLKIKKNEIINFFDFKPVYIRKSAAEIRFGGEGS
ECCCCHHHHCCCCCEEEEEEECCCEEEEECCCEEEEECCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]