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The map label for this gene is ydiB [H]

Identifier: 20807036

GI number: 20807036

Start: 542416

End: 542871

Strand: Direct

Name: ydiB [H]

Synonym: TTE0535

Alternate gene names: 20807036

Gene position: 542416-542871 (Clockwise)

Preceding gene: 20807035

Following gene: 20807037

Centisome position: 20.17

GC content: 39.04

Gene sequence:

>456_bases
ATGAAAAAATACATCTCAAAGAGCATGGAAGATACCAAAAATTTAGGGGAAAAGCTTGGGAAATTGTTAAAAAAAGGAGA
TATAGTGCTTCTCTATGGAGATTTGGGCAGCGGGAAGACGGTTTTTGCAAAGGGGATTGGGAAGGGATTAGGTATTGAAG
GTGAAGTGACAAGTCCTACCTTTACTTTGGTCAATGAATACCATGGAAGAGAGAAATTTTATCATTTTGACCTTTACAGG
ATTGACGATTACGCTGAGCTTTACGAGATAGGATATGAAGAATATTTTTATAATGAAGCGGTGTGCGCAGTTGAGTGGCC
AGAAAGGCTGGGGCCTCTTATTCCAAAGGAGAGGCTAGAAGTGCTCATTGAAAAAGGTGAAGAGGAGGATTTGAGAATTA
TAACTTTAAACGCTTTTGGGAAAAGATATGAAGAACTGCTAAAGGAGATGGATTGA

Upstream 100 bases:

>100_bases
CACTTTTTAAAGCTTAGTTTAACCCTCTTCCATGAGGGTTTTTATTTTTTATGAAGTTAGTATATAATAAAGTTATAAGC
TGTATGAGGTGACAGGGCAG

Downstream 100 bases:

>100_bases
TGAAGGTTTTGGCAATTGAGTCTTCTTCCAGGACGGCTGGAGTGGCATTGGTGGATGATAACGGGATAGTTGGCGAGTAT
TCAATAAACTACCTTAAGCA

Product: ATPase or kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 151; Mature: 151

Protein sequence:

>151_residues
MKKYISKSMEDTKNLGEKLGKLLKKGDIVLLYGDLGSGKTVFAKGIGKGLGIEGEVTSPTFTLVNEYHGREKFYHFDLYR
IDDYAELYEIGYEEYFYNEAVCAVEWPERLGPLIPKERLEVLIEKGEEEDLRIITLNAFGKRYEELLKEMD

Sequences:

>Translated_151_residues
MKKYISKSMEDTKNLGEKLGKLLKKGDIVLLYGDLGSGKTVFAKGIGKGLGIEGEVTSPTFTLVNEYHGREKFYHFDLYR
IDDYAELYEIGYEEYFYNEAVCAVEWPERLGPLIPKERLEVLIEKGEEEDLRIITLNAFGKRYEELLKEMD
>Mature_151_residues
MKKYISKSMEDTKNLGEKLGKLLKKGDIVLLYGDLGSGKTVFAKGIGKGLGIEGEVTSPTFTLVNEYHGREKFYHFDLYR
IDDYAELYEIGYEEYFYNEAVCAVEWPERLGPLIPKERLEVLIEKGEEEDLRIITLNAFGKRYEELLKEMD

Specific function: Displays ATPase activity, which is modulated by the oligomeric status of the protein. The physiological partner is unknown [H]

COG id: COG0802

COG function: function code R; Predicted ATPase or kinase

Gene ontology:

Cell location: Cytoplasm. Note=Localized predominantly at the cell poles and at the periphery of the bacterium [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0079 family [H]

Homologues:

Organism=Escherichia coli, GI1790610, Length=134, Percent_Identity=38.8059701492537, Blast_Score=105, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003442 [H]

Pfam domain/function: PF02367 UPF0079 [H]

EC number: NA

Molecular weight: Translated: 17446; Mature: 17446

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYISKSMEDTKNLGEKLGKLLKKGDIVLLYGDLGSGKTVFAKGIGKGLGIEGEVTSPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCH
FTLVNEYHGREKFYHFDLYRIDDYAELYEIGYEEYFYNEAVCAVEWPERLGPLIPKERLE
HHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCHHHHH
VLIEKGEEEDLRIITLNAFGKRYEELLKEMD
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKKYISKSMEDTKNLGEKLGKLLKKGDIVLLYGDLGSGKTVFAKGIGKGLGIEGEVTSPT
CCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEEECCCCCCCCCCCCCCCCH
FTLVNEYHGREKFYHFDLYRIDDYAELYEIGYEEYFYNEAVCAVEWPERLGPLIPKERLE
HHHHHHHCCCCEEEEEEEEEECHHHHHHHHHHHHHHHCCEEEEEECHHHCCCCCCHHHHH
VLIEKGEEEDLRIITLNAFGKRYEELLKEMD
HHHHCCCCCCEEEEEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]