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The map label for this gene is AmpC2 [H]

Identifier: 20806757

GI number: 20806757

Start: 239280

End: 239972

Strand: Direct

Name: AmpC2 [H]

Synonym: TTE0234

Alternate gene names: 20806757

Gene position: 239280-239972 (Clockwise)

Preceding gene: 20806756

Following gene: 20806758

Centisome position: 8.9

GC content: 34.34

Gene sequence:

>693_bases
ATGAAAGTTGATACGATATTTGATTTAGCTTCTGTTACTAAAGTTATGGGTACTACTCAAGCTATAATGAAACTGGTTTA
TGAAAATAGGCTGAAAGTGGCAGATAAGGTAGTAGAATTTATTCCTGAGTTTGGGCAGAATGGGAAAGAAGACATAACAA
TTTCTGATTTACTGACTCATACTTCTGGATTACCTGCTTGGAAACCAATTTACTATCACGCTTCGAATTCTAAAGATTCT
TTAAAGTATATATGTGCACTCCACTTAGAATACAAACCGGGTACTAATAGGAAATACAGTGATATAGGATTTATGGTCTT
GGGGTATGTAATAGAGATTATCACTGGGAAAAGGTTGGACGTTTACCTTAGAGAAGAAATTTATTTGCCGTTAGGGATGA
AAAATACACTTTTTAATCCCTTTAAATATCTAGAAAATCCTAGGGATAAAGTTGCAGCTACTTCATGGGGTAATCCTTAT
GAGTATAAAATGATTAAGGAAAAAAATGTATACCAAGTGGAAGAAAATATAAATGAATGGAACAAATGGAGAAATTATAC
TTTGATTGGTGAAGCTAATGACGGCAACTGTTTTTATGCGAATGAAGGTATTGCAGGACATGCGGGGTTATTTTCTACTG
TGAGTGATTTGGCTGTATTGGGGCAGTTAATGTTAAATGGAGCATTCCTGTAA

Upstream 100 bases:

>100_bases
CAGTTGTTTTGGTTGCCAAGGATGGAGTTATAGTCAAAGAAAAAGCATATGGATGGCGGCAAAAATATGATATGGGTAAA
GAATTGTCAATCCTCTTCCA

Downstream 100 bases:

>100_bases
TGAATAAAAAATAAGGGAGAATGGACTTTGAAAAAATAAGTACCTCCTGATAAAATACAGAGTGTAAGTTTAAGAACTTA
CCTCGAATTATCAAAATAAA

Product: Beta-lactamase class C and other penicillin binding proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MKVDTIFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTHTSGLPAWKPIYYHASNSKDS
LKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLDVYLREEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPY
EYKMIKEKNVYQVEENINEWNKWRNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVLGQLMLNGAFL

Sequences:

>Translated_230_residues
MKVDTIFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTHTSGLPAWKPIYYHASNSKDS
LKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLDVYLREEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPY
EYKMIKEKNVYQVEENINEWNKWRNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVLGQLMLNGAFL
>Mature_230_residues
MKVDTIFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTHTSGLPAWKPIYYHASNSKDS
LKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLDVYLREEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPY
EYKMIKEKNVYQVEENINEWNKWRNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVLGQLMLNGAFL

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=238, Percent_Identity=37.3949579831933, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1786574, Length=192, Percent_Identity=27.0833333333333, Blast_Score=72, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71983659, Length=106, Percent_Identity=39.622641509434, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI71983666, Length=106, Percent_Identity=39.622641509434, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 26192; Mature: 26192

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVDTIFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHH
TSGLPAWKPIYYHASNSKDSLKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLD
CCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE
VYLREEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPYEYKMIKEKNVYQVEENINEW
EEEEEEEEECCCCCHHHCCHHHHHCCCHHHEEECCCCCCEEEEEECCCCCCHHHHHHHHH
NKWRNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVLGQLMLNGAFL
HHHCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKVDTIFDLASVTKVMGTTQAIMKLVYENRLKVADKVVEFIPEFGQNGKEDITISDLLTH
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHH
TSGLPAWKPIYYHASNSKDSLKYICALHLEYKPGTNRKYSDIGFMVLGYVIEIITGKRLD
CCCCCCCCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEE
VYLREEIYLPLGMKNTLFNPFKYLENPRDKVAATSWGNPYEYKMIKEKNVYQVEENINEW
EEEEEEEEECCCCCHHHCCHHHHHCCCHHHEEECCCCCCEEEEEECCCCCCHHHHHHHHH
NKWRNYTLIGEANDGNCFYANEGIAGHAGLFSTVSDLAVLGQLMLNGAFL
HHHCCEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]