| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
Click here to switch to the map view.
The map label for this gene is 20806758
Identifier: 20806758
GI number: 20806758
Start: 240088
End: 241371
Strand: Direct
Name: 20806758
Synonym: TTE0235
Alternate gene names: NA
Gene position: 240088-241371 (Clockwise)
Preceding gene: 20806757
Following gene: 20806759
Centisome position: 8.93
GC content: 36.06
Gene sequence:
>1284_bases ATGAAGTATAAACAAAATGAAAAGATTTTGCAAGTAACGGGAGACACATTAATTGCGGGAGTAGACATAGCAAAAGAAAG CCATTATGCCAGAGCATTTGACTACAGAGGAGTAGAATATGGGAAATACCTGAGATTTGAAAACAATAGAGAAGGTATGA CAAAATTTCTTAACTGGGCAAAAGACTTGATGGAGAGACATAAGAAAAACAAACTAATAGTAGGGATAGAACCGACAGGG CAATATTGGCTGTGTTTTGCCCAATACCTTAAAGACAATAACATAAAGGTAGTATTGGTTAATCCATTTCATGTAAAGAT GAGCAAAGAATTAGATGACAATTCTCCCACAAAAAGCGATAAGAAAGACCCAAAAACAATAGCAATGCTAGTAAAAGACG GGAGATATGTAGAGCCGATAATACCTGAAGGAGTATATGCGGAATTAAGGGTAGCGATGGACATAAAAGAGAGGTTGAAC AAACAAATAGGGATGACAAAAAATCAAATAACAAGATGGTTGGACATATACTTTCCAGAGTTTAACACCGTATTTTCAGA CTGGGAAGGGAAAGCAGCACTTATCACATTAAGAGAATTTCCAACGCCTGAGAAGATAGCAAAAAAGAGTGCTGAAGAAA TAATATCGATATGGAAGAAAGAAGTACAAAGAGGGGTAGGAGAAAAAAGGGCTATAAAGCTGATAGAAACTGCTAAGGAG AGCATAGGGAAGAAGCAGGGCATAAAGATGGCGGAATACGAGATAAAGACTCTCATTGAACAATACGAATTTTTAAAAAA ACAAATTGAAGAAATAGAGAAGAAGATGGAAGAATTAATAGTTGAGATACCAGGGGTTAAAGAACTACTAGAAATCAAAG GGATAGGAGTAAACACAGTAGCAGATTTTATTGCAGAAGTAGGAGATATTGAAAAATATGAACATCCAAAACAGATACAA AAACTAAGGGGATTAAACCTAATAGAAAATAGCTCTGGTAAGCATAAAGGAGAAACGACAATAAGTAAAAGAGGGAGGAA GCGATTGAGGAGTGTGCTATTTAATGCAGTAATGGCCTTGGTCGCAAAAAACGAAGAATTTCGTGAACTACACAAATATT ACACCACCAGAGCGCAAAACCCGCTAAAAAAGAAGCAATCACTAATAGTATTGTGCAACAAACTGATAAGGATATTTTAT GTCATATTAAAGAAAGGAGTAAAATATGACCCAATCAAGATGATGAAGGACATAAAGAGGCCAGGCTTACAGGAAGCTGC ATAA
Upstream 100 bases:
>100_bases GGAGAATGGACTTTGAAAAAATAAGTACCTCCTGATAAAATACAGAGTGTAAGTTTAAGAACTTACCTCGAATTATCAAA ATAAACAGGAGGTACCTAAA
Downstream 100 bases:
>100_bases AAAGTGCCAACATACTATCAAATCAATTAAGGGTTAATCATCTTCTCTTCAGCTTTAACTTAGTCACATCTAAAGAGCTG ACCCTTAAGAAGAAATTGAT
Product: transposase
Products: NA
Alternate protein names: Transposase Family Protein; Transposase Domain Protein; LOW QUALITY PROTEIN Transposase; Transposase For Insertion Sequence NGRIS-14a; ISSep1-Like Transposase; Pilin Gene Inverting-Related Protein; ISYps2 Transposase; Insertion Sequence Transposase Protein; ISChy2 Transposase; Transposase Protein
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MKYKQNEKILQVTGDTLIAGVDIAKESHYARAFDYRGVEYGKYLRFENNREGMTKFLNWAKDLMERHKKNKLIVGIEPTG QYWLCFAQYLKDNNIKVVLVNPFHVKMSKELDDNSPTKSDKKDPKTIAMLVKDGRYVEPIIPEGVYAELRVAMDIKERLN KQIGMTKNQITRWLDIYFPEFNTVFSDWEGKAALITLREFPTPEKIAKKSAEEIISIWKKEVQRGVGEKRAIKLIETAKE SIGKKQGIKMAEYEIKTLIEQYEFLKKQIEEIEKKMEELIVEIPGVKELLEIKGIGVNTVADFIAEVGDIEKYEHPKQIQ KLRGLNLIENSSGKHKGETTISKRGRKRLRSVLFNAVMALVAKNEEFRELHKYYTTRAQNPLKKKQSLIVLCNKLIRIFY VILKKGVKYDPIKMMKDIKRPGLQEAA
Sequences:
>Translated_427_residues MKYKQNEKILQVTGDTLIAGVDIAKESHYARAFDYRGVEYGKYLRFENNREGMTKFLNWAKDLMERHKKNKLIVGIEPTG QYWLCFAQYLKDNNIKVVLVNPFHVKMSKELDDNSPTKSDKKDPKTIAMLVKDGRYVEPIIPEGVYAELRVAMDIKERLN KQIGMTKNQITRWLDIYFPEFNTVFSDWEGKAALITLREFPTPEKIAKKSAEEIISIWKKEVQRGVGEKRAIKLIETAKE SIGKKQGIKMAEYEIKTLIEQYEFLKKQIEEIEKKMEELIVEIPGVKELLEIKGIGVNTVADFIAEVGDIEKYEHPKQIQ KLRGLNLIENSSGKHKGETTISKRGRKRLRSVLFNAVMALVAKNEEFRELHKYYTTRAQNPLKKKQSLIVLCNKLIRIFY VILKKGVKYDPIKMMKDIKRPGLQEAA >Mature_427_residues MKYKQNEKILQVTGDTLIAGVDIAKESHYARAFDYRGVEYGKYLRFENNREGMTKFLNWAKDLMERHKKNKLIVGIEPTG QYWLCFAQYLKDNNIKVVLVNPFHVKMSKELDDNSPTKSDKKDPKTIAMLVKDGRYVEPIIPEGVYAELRVAMDIKERLN KQIGMTKNQITRWLDIYFPEFNTVFSDWEGKAALITLREFPTPEKIAKKSAEEIISIWKKEVQRGVGEKRAIKLIETAKE SIGKKQGIKMAEYEIKTLIEQYEFLKKQIEEIEKKMEELIVEIPGVKELLEIKGIGVNTVADFIAEVGDIEKYEHPKQIQ KLRGLNLIENSSGKHKGETTISKRGRKRLRSVLFNAVMALVAKNEEFRELHKYYTTRAQNPLKKKQSLIVLCNKLIRIFY VILKKGVKYDPIKMMKDIKRPGLQEAA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49578; Mature: 49578
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKQNEKILQVTGDTLIAGVDIAKESHYARAFDYRGVEYGKYLRFENNREGMTKFLNWA CCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHHHHH KDLMERHKKNKLIVGIEPTGQYWLCFAQYLKDNNIKVVLVNPFHVKMSKELDDNSPTKSD HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCC KKDPKTIAMLVKDGRYVEPIIPEGVYAELRVAMDIKERLNKQIGMTKNQITRWLDIYFPE CCCCHHEEHEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC FNTVFSDWEGKAALITLREFPTPEKIAKKSAEEIISIWKKEVQRGVGEKRAIKLIETAKE HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SIGKKQGIKMAEYEIKTLIEQYEFLKKQIEEIEKKMEELIVEIPGVKELLEIKGIGVNTV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH ADFIAEVGDIEKYEHPKQIQKLRGLNLIENSSGKHKGETTISKRGRKRLRSVLFNAVMAL HHHHHHHHCCHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAKNEEFRELHKYYTTRAQNPLKKKQSLIVLCNKLIRIFYVILKKGVKYDPIKMMKDIKR HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC PGLQEAA CCCCCCC >Mature Secondary Structure MKYKQNEKILQVTGDTLIAGVDIAKESHYARAFDYRGVEYGKYLRFENNREGMTKFLNWA CCCCCCCCEEEEECCCCEEECHHHHHHHHHHHHHCCCCCHHHHEEECCCHHHHHHHHHHH KDLMERHKKNKLIVGIEPTGQYWLCFAQYLKDNNIKVVLVNPFHVKMSKELDDNSPTKSD HHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCEEEEECCCCCCCCCCCCC KKDPKTIAMLVKDGRYVEPIIPEGVYAELRVAMDIKERLNKQIGMTKNQITRWLDIYFPE CCCCHHEEHEECCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCC FNTVFSDWEGKAALITLREFPTPEKIAKKSAEEIISIWKKEVQRGVGEKRAIKLIETAKE HHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH SIGKKQGIKMAEYEIKTLIEQYEFLKKQIEEIEKKMEELIVEIPGVKELLEIKGIGVNTV HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHH ADFIAEVGDIEKYEHPKQIQKLRGLNLIENSSGKHKGETTISKRGRKRLRSVLFNAVMAL HHHHHHHHCCHHCCCHHHHHHHHCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH VAKNEEFRELHKYYTTRAQNPLKKKQSLIVLCNKLIRIFYVILKKGVKYDPIKMMKDIKR HHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC PGLQEAA CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA