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The map label for this gene is ybbC [H]

Identifier: 20806740

GI number: 20806740

Start: 220602

End: 221744

Strand: Direct

Name: ybbC [H]

Synonym: TTE0214

Alternate gene names: 20806740

Gene position: 220602-221744 (Clockwise)

Preceding gene: 20806739

Following gene: 20806741

Centisome position: 8.2

GC content: 37.18

Gene sequence:

>1143_bases
TTGGTAAAGTGTGGAGTAGACCTTTTGGAAAAATATAAAGAGCTTTTTAAAGGCAAAAGAATTGGGCTAATTACTTCACC
TTCTGGTGTTAATCAAGATATGAAATCTACAATAGAAATCTTCCATGAGAATTTTAACTTAACTGCTTTGTTTTCACCAG
AGCACGGAGTGAGAGGAGAATTTCAAGCAGGTGAAAAAGTAAAGGGATACGTAGATGAAAGGACAGGAGTGAAAGTTTAT
AGCTTATACGGAGATACAAAAAAACCTACACCAGAAATGTTAGAAGAAATAGACGTTTTAGTGATAGATGTGCAGGATGT
GGGTTCCAGGTATTATACTTACCTTTATACCATGGCTTATGCAATGGAAGCGTGTAAAGAAAATGGTAAAGAATTTGTAG
TTTTAGATAGACCTAATCCTATTGGAGGTTTGAAAGTAGAAGGGAACATATTAGATACCAAGTTTAGGTCTTTTGTAGGA
TGGTATCCAATTCCGCAGCGCTATGGTCTTACTATAGGGGAGTTGTCTCATCTGTTTAACAAAGAATTTGGCATCAATTG
TGATTTGCACGTCGTAAAGCTTGAAGGCTGGAAAAGAGATATGTACTACGATGAAACAGGCCTTTTGTGGGTCAACCCCT
CACCTAACATTTCTTCTCTAGATGCAGCAGTGCTATATAGCGGTACTTGCTTATTTGAGGGAACTAATATTTCGGAGGGG
CGAGGTACTACAAGACCTTTTGAGATTATAGGTGCTCCTTGGATTGACCCTTACAAATTAGCCGATTCTATGAACAAAAA
AGGGCTAAAAGGGGTTGTATTTAGGCCAGTTTACTTTATACCGAGTTTTTCTAAACACAAAGGACAGTTGTGCAAAGGGG
TTCAAATACACGTAAAAGATAGAAAAGCTGTTGACTCAGTTGAAGTGGGGATAAAGCTATTATACGAGATAATAAGGCAA
AGTGGTGAAAATTTTGAATGGTTGCCACCATATGGGGAAAGTAACGTATATTTTATTGATTTGCTAGCAGGTACAGATGA
GTTAAGGCTGATGAAGTATGACGAGGATCAGTTATTGGACAAATGGAAAAGAGAAAGTGAAGAGTTTAAAAGATTGAAAG
AGAGTTATCATTTCTATGAATAG

Upstream 100 bases:

>100_bases
CAAACAGAGTGCATCCTACTCGTGAAAATGTGAAGATAATAAGGTTTAGGCGGCTTTTCCACAATGCTGTGCTTTCAGCT
TTGGATTGGAGGAATTAGAG

Downstream 100 bases:

>100_bases
AGAGGATTGAAAAAATGAAGAAAATAGAAGAAATGACATTGGAAGAAAAAATAGGGCAAATGCTGATGATAGGTTTTCCG
TCAGCTTTTTACGACGACCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MVKCGVDLLEKYKELFKGKRIGLITSPSGVNQDMKSTIEIFHENFNLTALFSPEHGVRGEFQAGEKVKGYVDERTGVKVY
SLYGDTKKPTPEMLEEIDVLVIDVQDVGSRYYTYLYTMAYAMEACKENGKEFVVLDRPNPIGGLKVEGNILDTKFRSFVG
WYPIPQRYGLTIGELSHLFNKEFGINCDLHVVKLEGWKRDMYYDETGLLWVNPSPNISSLDAAVLYSGTCLFEGTNISEG
RGTTRPFEIIGAPWIDPYKLADSMNKKGLKGVVFRPVYFIPSFSKHKGQLCKGVQIHVKDRKAVDSVEVGIKLLYEIIRQ
SGENFEWLPPYGESNVYFIDLLAGTDELRLMKYDEDQLLDKWKRESEEFKRLKESYHFYE

Sequences:

>Translated_380_residues
MVKCGVDLLEKYKELFKGKRIGLITSPSGVNQDMKSTIEIFHENFNLTALFSPEHGVRGEFQAGEKVKGYVDERTGVKVY
SLYGDTKKPTPEMLEEIDVLVIDVQDVGSRYYTYLYTMAYAMEACKENGKEFVVLDRPNPIGGLKVEGNILDTKFRSFVG
WYPIPQRYGLTIGELSHLFNKEFGINCDLHVVKLEGWKRDMYYDETGLLWVNPSPNISSLDAAVLYSGTCLFEGTNISEG
RGTTRPFEIIGAPWIDPYKLADSMNKKGLKGVVFRPVYFIPSFSKHKGQLCKGVQIHVKDRKAVDSVEVGIKLLYEIIRQ
SGENFEWLPPYGESNVYFIDLLAGTDELRLMKYDEDQLLDKWKRESEEFKRLKESYHFYE
>Mature_380_residues
MVKCGVDLLEKYKELFKGKRIGLITSPSGVNQDMKSTIEIFHENFNLTALFSPEHGVRGEFQAGEKVKGYVDERTGVKVY
SLYGDTKKPTPEMLEEIDVLVIDVQDVGSRYYTYLYTMAYAMEACKENGKEFVVLDRPNPIGGLKVEGNILDTKFRSFVG
WYPIPQRYGLTIGELSHLFNKEFGINCDLHVVKLEGWKRDMYYDETGLLWVNPSPNISSLDAAVLYSGTCLFEGTNISEG
RGTTRPFEIIGAPWIDPYKLADSMNKKGLKGVVFRPVYFIPSFSKHKGQLCKGVQIHVKDRKAVDSVEVGIKLLYEIIRQ
SGENFEWLPPYGESNVYFIDLLAGTDELRLMKYDEDQLLDKWKRESEEFKRLKESYHFYE

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 43577; Mature: 43577

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKCGVDLLEKYKELFKGKRIGLITSPSGVNQDMKSTIEIFHENFNLTALFSPEHGVRGE
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FQAGEKVKGYVDERTGVKVYSLYGDTKKPTPEMLEEIDVLVIDVQDVGSRYYTYLYTMAY
CCCCCCHHCEECCCCCEEEEEEECCCCCCCHHHHHCCCEEEEEHHHHCCHHHHHHHHHHH
AMEACKENGKEFVVLDRPNPIGGLKVEGNILDTKFRSFVGWYPIPQRYGLTIGELSHLFN
HHHHHHCCCCEEEEEECCCCCCCEEEECCEEHHHHHHHHCCCCCCHHHCCCHHHHHHHHC
KEFGINCDLHVVKLEGWKRDMYYDETGLLWVNPSPNISSLDAAVLYSGTCLFEGTNISEG
CCCCCCCCEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCCCC
RGTTRPFEIIGAPWIDPYKLADSMNKKGLKGVVFRPVYFIPSFSKHKGQLCKGVQIHVKD
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEC
RKAVDSVEVGIKLLYEIIRQSGENFEWLPPYGESNVYFIDLLAGTDELRLMKYDEDQLLD
CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEECCCCEEEEECCHHHHHH
KWKRESEEFKRLKESYHFYE
HHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVKCGVDLLEKYKELFKGKRIGLITSPSGVNQDMKSTIEIFHENFNLTALFSPEHGVRGE
CCCCCHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCC
FQAGEKVKGYVDERTGVKVYSLYGDTKKPTPEMLEEIDVLVIDVQDVGSRYYTYLYTMAY
CCCCCCHHCEECCCCCEEEEEEECCCCCCCHHHHHCCCEEEEEHHHHCCHHHHHHHHHHH
AMEACKENGKEFVVLDRPNPIGGLKVEGNILDTKFRSFVGWYPIPQRYGLTIGELSHLFN
HHHHHHCCCCEEEEEECCCCCCCEEEECCEEHHHHHHHHCCCCCCHHHCCCHHHHHHHHC
KEFGINCDLHVVKLEGWKRDMYYDETGLLWVNPSPNISSLDAAVLYSGTCLFEGTNISEG
CCCCCCCCEEEEEECCCCCCCEECCCCEEEECCCCCCCCCCCEEEECCEEEEECCCCCCC
RGTTRPFEIIGAPWIDPYKLADSMNKKGLKGVVFRPVYFIPSFSKHKGQLCKGVQIHVKD
CCCCCCEEEECCCCCCHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEEC
RKAVDSVEVGIKLLYEIIRQSGENFEWLPPYGESNVYFIDLLAGTDELRLMKYDEDQLLD
CHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCEEEEEEEECCCCEEEEECCHHHHHH
KWKRESEEFKRLKESYHFYE
HHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]