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The map label for this gene is AmpC [H]

Identifier: 20806739

GI number: 20806739

Start: 219532

End: 220599

Strand: Direct

Name: AmpC [H]

Synonym: TTE0213

Alternate gene names: 20806739

Gene position: 219532-220599 (Clockwise)

Preceding gene: 20806738

Following gene: 20806740

Centisome position: 8.16

GC content: 36.52

Gene sequence:

>1068_bases
ATGAGTTTTAATCTTTCGAAGTTGGAAAAGGCTTTTATGTTATTGGATAAAGGGATAGAAGAAGGAGTATTTCCAGGAGT
TGCGGCAGCAGTAGGTGATGACAAGGGTTTTGTGAGGGTTGAAGTAAAAGGGAATAAAAGATTATATCCGTATGATGAAA
AGCTTAACAGAGAATCTCTGTTTGATTTGGCTTCTCTTACAAAAGTTGTAGCTACAACTATGTTGTTAATGAAAATGTTA
GAGAGCGGACTTATATCTGTATACGATAGAGTTTCAGAGTATATCCCGAATTTTAAAGGCGATGGCAAAGATAAAATTAC
TATATTTCAACTTCTCACTCATACTTCTGGATTGCCGGCTTACCTTCCCTTTTATGAAAAATGCAAAGATTACCTTGATT
CTATAAATTACATATGTGAAGAAGTAAAGCTAAATCCAAATAAAAATGTGGAATACAGCGACTTAAATTTCATTCTGTTA
GGTAGGATATTAGAAATTTTAGGAGGCAATAGACTTGACACGTTATGTCATAAAGAGGTATTTGAGCCATTGGGAATGAA
AGATACAATGTTTAATCCTATAGGAAAGGATGTTGTTCCTACAGAATTAGACAAAACTACTGGCAAGGTTATAGAAGGGG
TATGCCATGATGAAAATGCGAGGTTTTTTGGAGGAGTGTCGGGACACGCAGGGCTATTTTCAACCATAGATGACCTTGTA
AAATTTGCTACAATGCTTATAAACTTTGGCAGAGTTAGAGAAGAAGTATTTTTGTCCTATCCTCTGTTTATCAGAATGAT
AACAAATTATACCCCAAATTCAGAAGAAAACAGGGGATGGGGATGGGTTATAAAAGGGCACACTGCTTTTGGCGGAGATT
TATTTTCGGAAAAAGCTTTTGGCCACACAGGTTTTACAGGTACTTCTATCTGGGTAGATCCGGAGTATAAAGTGTTCATG
ATACTACTAACAAACAGAGTGCATCCTACTCGTGAAAATGTGAAGATAATAAGGTTTAGGCGGCTTTTCCACAATGCTGT
GCTTTCAGCTTTGGATTGGAGGAATTAG

Upstream 100 bases:

>100_bases
GGAGAAAGAAAAAGCTCAAAAGCTTTTGGAGATGGCGGACGGATATATAGCAGAGGCGATTAAGCTAAAAGATTTAGTTT
TACAAGGAGAGGAATAAATT

Downstream 100 bases:

>100_bases
AGTTGGTAAAGTGTGGAGTAGACCTTTTGGAAAAATATAAAGAGCTTTTTAAAGGCAAAAGAATTGGGCTAATTACTTCA
CCTTCTGGTGTTAATCAAGA

Product: Beta-lactamase class C and other penicillin binding proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSFNLSKLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRESLFDLASLTKVVATTMLLMKML
ESGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPAYLPFYEKCKDYLDSINYICEEVKLNPNKNVEYSDLNFILL
GRILEILGGNRLDTLCHKEVFEPLGMKDTMFNPIGKDVVPTELDKTTGKVIEGVCHDENARFFGGVSGHAGLFSTIDDLV
KFATMLINFGRVREEVFLSYPLFIRMITNYTPNSEENRGWGWVIKGHTAFGGDLFSEKAFGHTGFTGTSIWVDPEYKVFM
ILLTNRVHPTRENVKIIRFRRLFHNAVLSALDWRN

Sequences:

>Translated_355_residues
MSFNLSKLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRESLFDLASLTKVVATTMLLMKML
ESGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPAYLPFYEKCKDYLDSINYICEEVKLNPNKNVEYSDLNFILL
GRILEILGGNRLDTLCHKEVFEPLGMKDTMFNPIGKDVVPTELDKTTGKVIEGVCHDENARFFGGVSGHAGLFSTIDDLV
KFATMLINFGRVREEVFLSYPLFIRMITNYTPNSEENRGWGWVIKGHTAFGGDLFSEKAFGHTGFTGTSIWVDPEYKVFM
ILLTNRVHPTRENVKIIRFRRLFHNAVLSALDWRN
>Mature_354_residues
SFNLSKLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRESLFDLASLTKVVATTMLLMKMLE
SGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPAYLPFYEKCKDYLDSINYICEEVKLNPNKNVEYSDLNFILLG
RILEILGGNRLDTLCHKEVFEPLGMKDTMFNPIGKDVVPTELDKTTGKVIEGVCHDENARFFGGVSGHAGLFSTIDDLVK
FATMLINFGRVREEVFLSYPLFIRMITNYTPNSEENRGWGWVIKGHTAFGGDLFSEKAFGHTGFTGTSIWVDPEYKVFMI
LLTNRVHPTRENVKIIRFRRLFHNAVLSALDWRN

Specific function: Unknown

COG id: COG1680

COG function: function code V; Beta-lactamase class C and other penicillin binding proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0214 family [H]

Homologues:

Organism=Escherichia coli, GI87082101, Length=369, Percent_Identity=29.2682926829268, Blast_Score=141, Evalue=5e-35,
Organism=Escherichia coli, GI1786574, Length=283, Percent_Identity=25.4416961130742, Blast_Score=75, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI115533026, Length=389, Percent_Identity=22.879177377892, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR001466
- InterPro:   IPR022849 [H]

Pfam domain/function: PF00144 Beta-lactamase [H]

EC number: NA

Molecular weight: Translated: 40304; Mature: 40173

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFNLSKLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRESL
CCCCHHHHHHHHHHHHHCHHHCCCCCHHHHCCCCCCEEEEEECCCCEECCCHHHCCHHHH
FDLASLTKVVATTMLLMKMLESGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
YLPFYEKCKDYLDSINYICEEVKLNPNKNVEYSDLNFILLGRILEILGGNRLDTLCHKEV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FEPLGMKDTMFNPIGKDVVPTELDKTTGKVIEGVCHDENARFFGGVSGHAGLFSTIDDLV
HHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
KFATMLINFGRVREEVFLSYPLFIRMITNYTPNSEENRGWGWVIKGHTAFGGDLFSEKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCC
GHTGFTGTSIWVDPEYKVFMILLTNRVHPTRENVKIIRFRRLFHNAVLSALDWRN
CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SFNLSKLEKAFMLLDKGIEEGVFPGVAAAVGDDKGFVRVEVKGNKRLYPYDEKLNRESL
CCCHHHHHHHHHHHHHCHHHCCCCCHHHHCCCCCCEEEEEECCCCEECCCHHHCCHHHH
FDLASLTKVVATTMLLMKMLESGLISVYDRVSEYIPNFKGDGKDKITIFQLLTHTSGLPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCC
YLPFYEKCKDYLDSINYICEEVKLNPNKNVEYSDLNFILLGRILEILGGNRLDTLCHKEV
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHH
FEPLGMKDTMFNPIGKDVVPTELDKTTGKVIEGVCHDENARFFGGVSGHAGLFSTIDDLV
HHCCCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHH
KFATMLINFGRVREEVFLSYPLFIRMITNYTPNSEENRGWGWVIKGHTAFGGDLFSEKAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCHHHHHCCC
GHTGFTGTSIWVDPEYKVFMILLTNRVHPTRENVKIIRFRRLFHNAVLSALDWRN
CCCCCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9274029; 9384377 [H]