Click here to switch to the map view.

The map label for this gene is SpoIID [H]

Identifier: 20806694

GI number: 20806694

Start: 172681

End: 173718

Strand: Direct

Name: SpoIID [H]

Synonym: TTE0168

Alternate gene names: 20806694

Gene position: 172681-173718 (Clockwise)

Preceding gene: 20806693

Following gene: 20806695

Centisome position: 6.42

GC content: 38.63

Gene sequence:

>1038_bases
ATGAGATATCTACTTTACGGGGTATTGTCTATTTTCTTAAGCCTTATAATCTTGCCCTCCATTGTAATTTTTGGCTTTTC
AACTCATGAGGTTTCAGTAGAAAAAAATTTAGTATTGGTTGAGGGAGGTAAATCAGTAAAGCTTGACAAACTCCCCTCTT
ATGAAGTTATAAGAGTTTTTATTACAAATCAGAATAAAATTGAAGAAATGCAGCTAGAAGATTACGTAAAAGGTGTTGTG
GCGGCAGAGATGCCTGCGGAGTTTGAAATAGAAGCCTTAAAAGCTCAAGCGGTTGCAGCAAGGACTTATGCTCTAGCAAA
AGAGGTAGCTTTAGGCGGAAAGGGCTGTGATTTGCATGAAGGGGTAGATGTGTGCACAGACCCCGAACACTGTCAGGCTT
GGCAATCCGTAGAGGAGCTTAAGGGAAAATGGGGAGAAAACTTTGAAAAATACTATAGCAAGATATCCCAGGCAGTGGAT
TCTACAAAAGGGCTTGTGATGGTGTATCAGGATGCTTTGATTTTGCCTGTATATCACGCAATAAGCGGTGGCAGGACTGA
AAACTCTGAAGATGTTTGGCAGAAAAAGATACCCTATTTAAGAAGCGTCGTATCTCCGGGGGAAGAAGTGGCTTCAAAGT
ACAAAACTACTGTAGTTGTTTCTCAGGCTGAGTTTGTAAAAAAATTAAAAGAAAGGCAACCTTCTTTGAAATTGACCAGC
AACAATATTTTGTCAGAAATAAAAAACATAGAAAGGACACAGGCAGGCCATGTAAAAACTTTAAAAATTGGGGATGTAAC
TTTTGAGGGGAAAGAAATAAAAGAGCTTTTTGGGCTTAATTCTACAAATTTTACCTTCAGCAAGCAGAAGGATGACATTG
TAATTACGGTAATTGGATACGGTCATGGAGTGGGAATGAGCCAGTATGGAGCTAATGCATTGGCAAAAGAGGGGAAAAAG
TTTGATGAGATATTAAAATACTACTATCAGGGAATTGAGATAGTGAAAATTGAGGATTTGTTGAAAGGTAAACACTAG

Upstream 100 bases:

>100_bases
CCTCTTTTACTAGGGGGTCCTTTTTATATATTTTTTGAAGTAATATGAGTATCTTTTCTCACATATACTTTTATGTAGGC
TCAAAGATGGGAGGAGGAAG

Downstream 100 bases:

>100_bases
ACAACCTTTCATTTTTTTGTATAAACAGCCTCCACAGTGGTTAAAATACCATTTGGAGGTGAGAATTTATGAGAATAAAC
AGAGAAAATTTTCTTAGGTT

Product: sporulation protein and related proteins

Products: NA

Alternate protein names: Stage II sporulation protein C [H]

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MRYLLYGVLSIFLSLIILPSIVIFGFSTHEVSVEKNLVLVEGGKSVKLDKLPSYEVIRVFITNQNKIEEMQLEDYVKGVV
AAEMPAEFEIEALKAQAVAARTYALAKEVALGGKGCDLHEGVDVCTDPEHCQAWQSVEELKGKWGENFEKYYSKISQAVD
STKGLVMVYQDALILPVYHAISGGRTENSEDVWQKKIPYLRSVVSPGEEVASKYKTTVVVSQAEFVKKLKERQPSLKLTS
NNILSEIKNIERTQAGHVKTLKIGDVTFEGKEIKELFGLNSTNFTFSKQKDDIVITVIGYGHGVGMSQYGANALAKEGKK
FDEILKYYYQGIEIVKIEDLLKGKH

Sequences:

>Translated_345_residues
MRYLLYGVLSIFLSLIILPSIVIFGFSTHEVSVEKNLVLVEGGKSVKLDKLPSYEVIRVFITNQNKIEEMQLEDYVKGVV
AAEMPAEFEIEALKAQAVAARTYALAKEVALGGKGCDLHEGVDVCTDPEHCQAWQSVEELKGKWGENFEKYYSKISQAVD
STKGLVMVYQDALILPVYHAISGGRTENSEDVWQKKIPYLRSVVSPGEEVASKYKTTVVVSQAEFVKKLKERQPSLKLTS
NNILSEIKNIERTQAGHVKTLKIGDVTFEGKEIKELFGLNSTNFTFSKQKDDIVITVIGYGHGVGMSQYGANALAKEGKK
FDEILKYYYQGIEIVKIEDLLKGKH
>Mature_345_residues
MRYLLYGVLSIFLSLIILPSIVIFGFSTHEVSVEKNLVLVEGGKSVKLDKLPSYEVIRVFITNQNKIEEMQLEDYVKGVV
AAEMPAEFEIEALKAQAVAARTYALAKEVALGGKGCDLHEGVDVCTDPEHCQAWQSVEELKGKWGENFEKYYSKISQAVD
STKGLVMVYQDALILPVYHAISGGRTENSEDVWQKKIPYLRSVVSPGEEVASKYKTTVVVSQAEFVKKLKERQPSLKLTS
NNILSEIKNIERTQAGHVKTLKIGDVTFEGKEIKELFGLNSTNFTFSKQKDDIVITVIGYGHGVGMSQYGANALAKEGKK
FDEILKYYYQGIEIVKIEDLLKGKH

Specific function: May act at the level of sigma-G activity or its stability. SpoIID is probably required for engulfment [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013486
- InterPro:   IPR013693
- InterPro:   IPR014225 [H]

Pfam domain/function: PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 38529; Mature: 38529

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYLLYGVLSIFLSLIILPSIVIFGFSTHEVSVEKNLVLVEGGKSVKLDKLPSYEVIRVF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCEEEECCCCCCEEEEEE
ITNQNKIEEMQLEDYVKGVVAAEMPAEFEIEALKAQAVAARTYALAKEVALGGKGCDLHE
EECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
GVDVCTDPEHCQAWQSVEELKGKWGENFEKYYSKISQAVDSTKGLVMVYQDALILPVYHA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
ISGGRTENSEDVWQKKIPYLRSVVSPGEEVASKYKTTVVVSQAEFVKKLKERQPSLKLTS
HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHHHHHHHCCCCEEECH
NNILSEIKNIERTQAGHVKTLKIGDVTFEGKEIKELFGLNSTNFTFSKQKDDIVITVIGY
HHHHHHHHHHHHHCCCCEEEEEECCEEECCHHHHHHHCCCCCCEEEECCCCCEEEEEEEC
GHGVGMSQYGANALAKEGKKFDEILKYYYQGIEIVKIEDLLKGKH
CCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHCCCC
>Mature Secondary Structure
MRYLLYGVLSIFLSLIILPSIVIFGFSTHEVSVEKNLVLVEGGKSVKLDKLPSYEVIRVF
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCEEEECCCCCCEEEEEE
ITNQNKIEEMQLEDYVKGVVAAEMPAEFEIEALKAQAVAARTYALAKEVALGGKGCDLHE
EECCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHC
GVDVCTDPEHCQAWQSVEELKGKWGENFEKYYSKISQAVDSTKGLVMVYQDALILPVYHA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
ISGGRTENSEDVWQKKIPYLRSVVSPGEEVASKYKTTVVVSQAEFVKKLKERQPSLKLTS
HCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHEEEEHHHHHHHHHHCCCCEEECH
NNILSEIKNIERTQAGHVKTLKIGDVTFEGKEIKELFGLNSTNFTFSKQKDDIVITVIGY
HHHHHHHHHHHHHCCCCEEEEEECCEEECCHHHHHHHCCCCCCEEEECCCCCEEEEEEEC
GHGVGMSQYGANALAKEGKKFDEILKYYYQGIEIVKIEDLLKGKH
CCCCCHHHHCCHHHHHCCHHHHHHHHHHHCCCEEEEEHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3011962; 9384377 [H]