| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is 20806693
Identifier: 20806693
GI number: 20806693
Start: 171096
End: 172577
Strand: Direct
Name: 20806693
Synonym: TTE0167
Alternate gene names: NA
Gene position: 171096-172577 (Clockwise)
Preceding gene: 20806692
Following gene: 20806694
Centisome position: 6.36
GC content: 39.95
Gene sequence:
>1482_bases ATGAAAAAATTGGCTTTTGCGTTTTTCTTTGTCTTTCTTTTTTCTATGTTTCCTGCTAATATCTTTGCCTATAATTCTGG ATTTGAAGCGGGAATTTCAAATGAGCAGGAGTACAAAGAGGTAGTTTTCATAACAGGAGAACCTGTTGTATTTAGCGGCT TCTTAAAAGTGACAAGCTCTAAAAGAGGAGATACTACCACTACTACTTACAGGTATACCCTTTCTACTCCTTCTGGGGAC AAGCTTACAAGGACTCTTACATTTGTTACGGAAGAAAAGCAAAAACCTGAATATAATCAGATTATAGCTGAGACTACACT TAAAAACTACACTGAAAGTATAAAAATTGGGGGAGATACCTATACCCTCGACAGAAATAACGGCTATATTTACCAGGGAT CTGAGGTGAAAAGCATAAATCCAGCTGTTACCTATTACGCAGGGAATTACTCTGGTTCAAAGGTCTACAGGATGAACGGA AATAAAGGTACTGTAAAGGTGAGTATAGAAGACAAGACCGTAGGATTTTCCCACAAATATGGCAGTGCAGAGACTCACCA GATGTACTATCAAATTGAAGCTACAATTGGAACGGGAAATAACGTAAAAAAATGGGTTGGAGAGGTGCAGGTAAATGTTT CTTTTACAGATAAGTCTTCTATAGAGTATGTGGAAAATGACCCGCAGTATATAAGCTTTAGAGGGGGCTATCTCTTAAGG AGAAACAGCGAAGATGTTATGACTTACGCTTACAACCTCCCTAAGTTTGACGAGAATGGGAATGAAATAGGCAGAAATAC TGGTAGCAATAGCTTAAGGATGGATGGAATTTATACAGAGAATAGGCTTGTTGTCCCGGAGGTTAGAGATATAAGCGGGA CATGGGGTAAAGACGACATAAACAAGCTTTTAAGCTTAGAAATTTTCCCAAAGGATTCTTTGTACTTTGGTCCCAAGCTT TACATACTTCGTTCAGATTTTGCTGTAGCGGTAGCAAAAGCTATTGGGATTGCTCCTTATGAGCCTCCCAAAAATGCTCT TTACTCTGCGAGGAAAATGCCGGTCGAAGTTTCGCCTTTTAAGGATGTACCGACAAATGACCCCAATTACGGTTATATAA AAGCTGCAAGTGATATAGGCCTTATAAGTGGGATTGGACCTTCTCAATTTGGGCCCTCCCTGCGTCTTACCCGGGCTCAG GCAGCCGTAATATTTATAAGGGCTTTGGGGCTTGAAAATCTGGCGCCACAGGGGTATTTCAAAACAGGTTTTTTAGATGA TTCTTCAATTCCCTTGTGGGCAAAAAGAAGTGTATATGTGGCCCGTGAAATAGGGCTTGTGGGCGGCGATACCTTTGGGA GGTTTAATCCTGAAAGCTATGTGACAAGGGAAGAAGCCGCGTCAATGATTTCGCGTATGATAGATTTTATGATGAAGGAT TTGACTTTTGATTATGTAGAAAGAGTATTGAATTTTAAATAA
Upstream 100 bases:
>100_bases TGATGTTTCTTCTCTCAAAAAAGGAGATTTTATATACATGATAAGAAGCGCCTCCAGGGGAATAATTGTAACTGTCAAAT AAGAAGCGGGGGAATGGGAA
Downstream 100 bases:
>100_bases GGACCTCTTTTACTAGGGGGTCCTTTTTATATATTTTTTGAAGTAATATGAGTATCTTTTCTCACATATACTTTTATGTA GGCTCAAAGATGGGAGGAGG
Product: S-layer-like domain-containing protein
Products: NA
Alternate protein names: Alkaline cellulase; Endo-1,4-beta-glucanase [H]
Number of amino acids: Translated: 493; Mature: 493
Protein sequence:
>493_residues MKKLAFAFFFVFLFSMFPANIFAYNSGFEAGISNEQEYKEVVFITGEPVVFSGFLKVTSSKRGDTTTTTYRYTLSTPSGD KLTRTLTFVTEEKQKPEYNQIIAETTLKNYTESIKIGGDTYTLDRNNGYIYQGSEVKSINPAVTYYAGNYSGSKVYRMNG NKGTVKVSIEDKTVGFSHKYGSAETHQMYYQIEATIGTGNNVKKWVGEVQVNVSFTDKSSIEYVENDPQYISFRGGYLLR RNSEDVMTYAYNLPKFDENGNEIGRNTGSNSLRMDGIYTENRLVVPEVRDISGTWGKDDINKLLSLEIFPKDSLYFGPKL YILRSDFAVAVAKAIGIAPYEPPKNALYSARKMPVEVSPFKDVPTNDPNYGYIKAASDIGLISGIGPSQFGPSLRLTRAQ AAVIFIRALGLENLAPQGYFKTGFLDDSSIPLWAKRSVYVAREIGLVGGDTFGRFNPESYVTREEAASMISRMIDFMMKD LTFDYVERVLNFK
Sequences:
>Translated_493_residues MKKLAFAFFFVFLFSMFPANIFAYNSGFEAGISNEQEYKEVVFITGEPVVFSGFLKVTSSKRGDTTTTTYRYTLSTPSGD KLTRTLTFVTEEKQKPEYNQIIAETTLKNYTESIKIGGDTYTLDRNNGYIYQGSEVKSINPAVTYYAGNYSGSKVYRMNG NKGTVKVSIEDKTVGFSHKYGSAETHQMYYQIEATIGTGNNVKKWVGEVQVNVSFTDKSSIEYVENDPQYISFRGGYLLR RNSEDVMTYAYNLPKFDENGNEIGRNTGSNSLRMDGIYTENRLVVPEVRDISGTWGKDDINKLLSLEIFPKDSLYFGPKL YILRSDFAVAVAKAIGIAPYEPPKNALYSARKMPVEVSPFKDVPTNDPNYGYIKAASDIGLISGIGPSQFGPSLRLTRAQ AAVIFIRALGLENLAPQGYFKTGFLDDSSIPLWAKRSVYVAREIGLVGGDTFGRFNPESYVTREEAASMISRMIDFMMKD LTFDYVERVLNFK >Mature_493_residues MKKLAFAFFFVFLFSMFPANIFAYNSGFEAGISNEQEYKEVVFITGEPVVFSGFLKVTSSKRGDTTTTTYRYTLSTPSGD KLTRTLTFVTEEKQKPEYNQIIAETTLKNYTESIKIGGDTYTLDRNNGYIYQGSEVKSINPAVTYYAGNYSGSKVYRMNG NKGTVKVSIEDKTVGFSHKYGSAETHQMYYQIEATIGTGNNVKKWVGEVQVNVSFTDKSSIEYVENDPQYISFRGGYLLR RNSEDVMTYAYNLPKFDENGNEIGRNTGSNSLRMDGIYTENRLVVPEVRDISGTWGKDDINKLLSLEIFPKDSLYFGPKL YILRSDFAVAVAKAIGIAPYEPPKNALYSARKMPVEVSPFKDVPTNDPNYGYIKAASDIGLISGIGPSQFGPSLRLTRAQ AAVIFIRALGLENLAPQGYFKTGFLDDSSIPLWAKRSVYVAREIGLVGGDTFGRFNPESYVTREEAASMISRMIDFMMKD LTFDYVERVLNFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 SLH (S-layer homology) domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005086 - InterPro: IPR008979 - InterPro: IPR001547 - InterPro: IPR018087 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR001119 [H]
Pfam domain/function: PF03424 CBM_17_28; PF00150 Cellulase; PF00395 SLH [H]
EC number: =3.2.1.4 [H]
Molecular weight: Translated: 55307; Mature: 55307
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS01072 SLH_DOMAIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLAFAFFFVFLFSMFPANIFAYNSGFEAGISNEQEYKEVVFITGEPVVFSGFLKVTSS CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECC KRGDTTTTTYRYTLSTPSGDKLTRTLTFVTEEKQKPEYNQIIAETTLKNYTESIKIGGDT CCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCE YTLDRNNGYIYQGSEVKSINPAVTYYAGNYSGSKVYRMNGNKGTVKVSIEDKTVGFSHKY EEEECCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCEECCCCCC GSAETHQMYYQIEATIGTGNNVKKWVGEVQVNVSFTDKSSIEYVENDPQYISFRGGYLLR CCCCCEEEEEEEEEEECCCCCHHHEEEEEEEEEEECCCCCCEEECCCCCEEEEECCEEEE RNSEDVMTYAYNLPKFDENGNEIGRNTGSNSLRMDGIYTENRLVVPEVRDISGTWGKDDI ECCCCEEEEEECCCCCCCCCCHHCCCCCCCCEEECEEEECCEEECCCHHCCCCCCCHHHH NKLLSLEIFPKDSLYFGPKLYILRSDFAVAVAKAIGIAPYEPPKNALYSARKMPVEVSPF HHEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCC KDVPTNDPNYGYIKAASDIGLISGIGPSQFGPSLRLTRAQAAVIFIRALGLENLAPQGYF CCCCCCCCCCCEEEECCCCCEEECCCHHHCCCCEEEEHHHHEEEEEEHHCCCCCCCCCCE KTGFLDDSSIPLWAKRSVYVAREIGLVGGDTFGRFNPESYVTREEAASMISRMIDFMMKD EECCCCCCCCCEEECCCEEEEEEECEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH LTFDYVERVLNFK CCHHHHHHHHCCC >Mature Secondary Structure MKKLAFAFFFVFLFSMFPANIFAYNSGFEAGISNEQEYKEVVFITGEPVVFSGFLKVTSS CCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEEEEECCCCEEEEEEEEEECC KRGDTTTTTYRYTLSTPSGDKLTRTLTFVTEEKQKPEYNQIIAETTLKNYTESIKIGGDT CCCCCCEEEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCE YTLDRNNGYIYQGSEVKSINPAVTYYAGNYSGSKVYRMNGNKGTVKVSIEDKTVGFSHKY EEEECCCCEEEECCCCCCCCCEEEEEECCCCCCEEEEEECCCCEEEEEEECCEECCCCCC GSAETHQMYYQIEATIGTGNNVKKWVGEVQVNVSFTDKSSIEYVENDPQYISFRGGYLLR CCCCCEEEEEEEEEEECCCCCHHHEEEEEEEEEEECCCCCCEEECCCCCEEEEECCEEEE RNSEDVMTYAYNLPKFDENGNEIGRNTGSNSLRMDGIYTENRLVVPEVRDISGTWGKDDI ECCCCEEEEEECCCCCCCCCCHHCCCCCCCCEEECEEEECCEEECCCHHCCCCCCCHHHH NKLLSLEIFPKDSLYFGPKLYILRSDFAVAVAKAIGIAPYEPPKNALYSARKMPVEVSPF HHEEEEEECCCCCEEECCEEEEEECCHHHHHHHHHCCCCCCCCHHHHHHHHCCCEEECCC KDVPTNDPNYGYIKAASDIGLISGIGPSQFGPSLRLTRAQAAVIFIRALGLENLAPQGYF CCCCCCCCCCCEEEECCCCCEEECCCHHHCCCCEEEEHHHHEEEEEEHHCCCCCCCCCCE KTGFLDDSSIPLWAKRSVYVAREIGLVGGDTFGRFNPESYVTREEAASMISRMIDFMMKD EECCCCCCCCCEEECCCEEEEEEECEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHH LTFDYVERVLNFK CCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2230718; 9399567; 11501997 [H]