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The map label for this gene is yabE [H]

Identifier: 20806641

GI number: 20806641

Start: 114449

End: 115465

Strand: Direct

Name: yabE [H]

Synonym: TTE0112

Alternate gene names: 20806641

Gene position: 114449-115465 (Clockwise)

Preceding gene: 20806640

Following gene: 20806642

Centisome position: 4.26

GC content: 42.87

Gene sequence:

>1017_bases
ATGGATACAGATGACCTTAGAAGGCGACTAAAACCGGTTGCCCTTGTAACACTGGTAGCAGTCGCTTTTGCGGCCATTGG
CCTTTTGGCTTATGTGAATTTGAGAAAGGAAATAACCCTTCAGGATGAAAATAAAAAAATAGTGATAACTACCTTTGCAT
CCACAGTAGGAGATTTGCTAAAGGAAAGAGGCATTGAACTAAGGCAGGAAGATGTGGTCAAACCCTCTCTTAATACGCGG
CTTAAAAATGGGATGACGATAACCATCAAAAGAGCAGTGCCTGTTACACTAAATGTAGGAGGGAAAGTAGAAAATATATA
CTCAGCAGCTTCTACTATAAAAGACCTGCTTTCTGAGAGAGGGATAGCTTTGGGGCCACAGGACAAAATCAACATGACTT
TGGATACGCCTGTATTTGCTTACATGTACATCGACATCACAAAGGTGACGGAGAAGATTATAACTGAAGAAATAGATATA
CCGTATCAGATAGAGACAGTGAAGGACTATACGATGGAAAGGGGTCAGACTAGAATAGCCCAACAAGGGGAAATGGGGAA
AAAAGTAAAAGTTATAAAAGTCACTTATGAGAATGGAAAAGAAGTAGCGCGAAACGTAATTGAAGAAAAAGTGATTAAAA
ACCCCGTTCCCCAGATCGTACGAGTTGGGACTTTAGGGGTTTTTACTACTTCTAGAGGAGAAATCGTAAGATACAGAGAA
GTGAAGACAATGCTAGCTACAGCTTATGACAGCAGTGAAGAGAGCACAGGTAAAAAGCCTGGAGACCCCGACTACGGCAT
TACTGCGAGTGGAATGGTGGCGAGAAGGGGAGTAGTTGCTGTGGACCCCAGAGTTATACCGCTAGGAACGAGGCTGTATG
TAGAAGGATACGGCTTTTGCATTGCAGCTGATACTGGAGGGGCTATAAAGGGCAATCGAATTGACGTGTATTTTCCTACC
AGAGAAGAGGTCAGAAACTGGGGGAGAAGATACGTCAAAGTGTACATTCTTCAGTAG

Upstream 100 bases:

>100_bases
ATAACTGAAAAATTGTGTATAAAAATTTGACAAATTAATTTAATTGCATTAAAATTACTTACGACTCCCCTAAACCAAAT
TTTTAACAGGAGGGTATGGG

Downstream 100 bases:

>100_bases
GGCAGGGGCTTCCCTGCCTGATTTTTTGAGGTGAAGATATGAAGGCGAAAAAGAAATGGGGTCAAAATTTCATATTTGAC
AAAAATCTTCTTTCAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MDTDDLRRRLKPVALVTLVAVAFAAIGLLAYVNLRKEITLQDENKKIVITTFASTVGDLLKERGIELRQEDVVKPSLNTR
LKNGMTITIKRAVPVTLNVGGKVENIYSAASTIKDLLSERGIALGPQDKINMTLDTPVFAYMYIDITKVTEKIITEEIDI
PYQIETVKDYTMERGQTRIAQQGEMGKKVKVIKVTYENGKEVARNVIEEKVIKNPVPQIVRVGTLGVFTTSRGEIVRYRE
VKTMLATAYDSSEESTGKKPGDPDYGITASGMVARRGVVAVDPRVIPLGTRLYVEGYGFCIAADTGGAIKGNRIDVYFPT
REEVRNWGRRYVKVYILQ

Sequences:

>Translated_338_residues
MDTDDLRRRLKPVALVTLVAVAFAAIGLLAYVNLRKEITLQDENKKIVITTFASTVGDLLKERGIELRQEDVVKPSLNTR
LKNGMTITIKRAVPVTLNVGGKVENIYSAASTIKDLLSERGIALGPQDKINMTLDTPVFAYMYIDITKVTEKIITEEIDI
PYQIETVKDYTMERGQTRIAQQGEMGKKVKVIKVTYENGKEVARNVIEEKVIKNPVPQIVRVGTLGVFTTSRGEIVRYRE
VKTMLATAYDSSEESTGKKPGDPDYGITASGMVARRGVVAVDPRVIPLGTRLYVEGYGFCIAADTGGAIKGNRIDVYFPT
REEVRNWGRRYVKVYILQ
>Mature_338_residues
MDTDDLRRRLKPVALVTLVAVAFAAIGLLAYVNLRKEITLQDENKKIVITTFASTVGDLLKERGIELRQEDVVKPSLNTR
LKNGMTITIKRAVPVTLNVGGKVENIYSAASTIKDLLSERGIALGPQDKINMTLDTPVFAYMYIDITKVTEKIITEEIDI
PYQIETVKDYTMERGQTRIAQQGEMGKKVKVIKVTYENGKEVARNVIEEKVIKNPVPQIVRVGTLGVFTTSRGEIVRYRE
VKTMLATAYDSSEESTGKKPGDPDYGITASGMVARRGVVAVDPRVIPLGTRLYVEGYGFCIAADTGGAIKGNRIDVYFPT
REEVRNWGRRYVKVYILQ

Specific function: Unknown

COG id: COG3583

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G5 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010611
- InterPro:   IPR014733
- InterPro:   IPR007137
- InterPro:   IPR011098 [H]

Pfam domain/function: PF06725 3D; PF03990 DUF348; PF07501 G5 [H]

EC number: NA

Molecular weight: Translated: 37653; Mature: 37653

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS51109 G5

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTDDLRRRLKPVALVTLVAVAFAAIGLLAYVNLRKEITLQDENKKIVITTFASTVGDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHH
KERGIELRQEDVVKPSLNTRLKNGMTITIKRAVPVTLNVGGKVENIYSAASTIKDLLSER
HHCCCCCCHHHCCCCCHHHHHCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHC
GIALGPQDKINMTLDTPVFAYMYIDITKVTEKIITEEIDIPYQIETVKDYTMERGQTRIA
CCEECCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH
QQGEMGKKVKVIKVTYENGKEVARNVIEEKVIKNPVPQIVRVGTLGVFTTSRGEIVRYRE
HCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHEECCEEEEECCCCCEEEHHH
VKTMLATAYDSSEESTGKKPGDPDYGITASGMVARRGVVAVDPRVIPLGTRLYVEGYGFC
HHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHCCEEEECCEEEEECCEEEEEEEEEE
IAADTGGAIKGNRIDVYFPTREEVRNWGRRYVKVYILQ
EEECCCCCEECCEEEEEECCHHHHHHHCCEEEEEEEEC
>Mature Secondary Structure
MDTDDLRRRLKPVALVTLVAVAFAAIGLLAYVNLRKEITLQDENKKIVITTFASTVGDLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEEEHHHHHHHHH
KERGIELRQEDVVKPSLNTRLKNGMTITIKRAVPVTLNVGGKVENIYSAASTIKDLLSER
HHCCCCCCHHHCCCCCHHHHHCCCEEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHHC
GIALGPQDKINMTLDTPVFAYMYIDITKVTEKIITEEIDIPYQIETVKDYTMERGQTRIA
CCEECCCCCEEEEECCCEEEEEEEEHHHHHHHHHHHHCCCCEEEEHHHHHHHHCCHHHHH
QQGEMGKKVKVIKVTYENGKEVARNVIEEKVIKNPVPQIVRVGTLGVFTTSRGEIVRYRE
HCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHEECCEEEEECCCCCEEEHHH
VKTMLATAYDSSEESTGKKPGDPDYGITASGMVARRGVVAVDPRVIPLGTRLYVEGYGFC
HHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCHHHHCCEEEECCEEEEECCEEEEEEEEEE
IAADTGGAIKGNRIDVYFPTREEVRNWGRRYVKVYILQ
EEECCCCCEECCEEEEEECCHHHHHHHCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]