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The map label for this gene is PerM [C]

Identifier: 20806564

GI number: 20806564

Start: 26524

End: 27588

Strand: Reverse

Name: PerM [C]

Synonym: TTE0022

Alternate gene names: 20806564

Gene position: 27588-26524 (Counterclockwise)

Preceding gene: 20806567

Following gene: 20806555

Centisome position: 1.03

GC content: 32.86

Gene sequence:

>1065_bases
GTGAATAATTTTCTATTGAGATACGGTGATATAATAAAAAAAACACTACTCATTGTTGCTGTCTTTATTATATTTTACTT
AATCATATTTAAAATTATTCCTTTCTTGATGCCGTTTGTAGTGGCTTTGCTTCTCGCTGTGATAATTGATCCTGGTGTAA
ATTTCTTAGAGAAAAAATTAAAGGTGCCGAGAGGACTAGCATCCTTTATTTTACTTTTGATATTAATAGGTGTGATAGGA
TCACTTATTGCAATATCAATAACACAACTTATATATGAACTAAGTTCTCTTGCGGAAATAAGCACAAATTATGCAAATAC
TATTAATGACATAATTTTAAATCTTGTTGATAGAATAAGAATGTATTACATATCATTGCCCCCAAATATTACATCCCTTA
TTGAAAGCAACATGCAGTCGATTTTAAACTATGTATCATTATTTGCAAAAAATCTTGCTACATGGCTTTTGAATTTTGCA
ACAAAATTGCCTAACTTTTTCTTTATGACTTTGATAACACTTGTTGCTACTTTTTTTATAAGCAAAGATAAACAGCTTAT
ACTAGATTTTATAAAAAGGCAGATTCCATCTCATTGGGCACAGCATGCAAAAAATATTCAGGTAGACCTTTTAAAGACAT
TTTTCGGTTATCTGCGAGCAGTAGCAACAATAATGCTTATAACCTTTTTGGAAGTCTCCATAGGCCTTGCAATAATAGGT
TTTGACTATCCATTTCTATTGGGTCTTCTTGTAACCATTGTAGATGCATTGCCCGTACTAGGTTCTGGTGCTGTCATGGT
ACCATGGGCGCTTTATAACATCATAATGAAAAACTACATGGTAGGGATATATCTTTTAATACTGTACGGCTTGGTGGTAG
TTGTAAGACAGATGATAGAGCCTAAGATTGTAGGTCAGAGCATCGGACTTCATCCTCTTGTTACGCTTTTATCTATGTTT
ATAGGTGTAAAACTTTTTGGCGCTATAGGACTTGTAATAGGGCCTGTATTTGTAGTAGTATTTAAAGCTCTTCAAAAAGC
AGAAATTATCCCGCCTTGGAAATAA

Upstream 100 bases:

>100_bases
ATCCGTTTCGGCGGATTTTTTTATTACAGTCAACAATTACTCTTAATGATAGACTTTTATCAATTCTCATATTATAATAA
AAAGGAAGGAGGTCAAAACG

Downstream 100 bases:

>100_bases
AAAGAAAGGGTCACAAACCCTTTCTTTTTATGCAATAGTATCTTCCACAGTCCCACCTGCGGGAATAAATGGAAGCACCA
TTTCGTCTTTGTCTATAATA

Product: permease

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MNNFLLRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRGLASFILLLILIGVIG
SLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFA
TKLPNFFFMTLITLVATFFISKDKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIG
FDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKIVGQSIGLHPLVTLLSMF
IGVKLFGAIGLVIGPVFVVVFKALQKAEIIPPWK

Sequences:

>Translated_354_residues
MNNFLLRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRGLASFILLLILIGVIG
SLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFA
TKLPNFFFMTLITLVATFFISKDKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIG
FDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKIVGQSIGLHPLVTLLSMF
IGVKLFGAIGLVIGPVFVVVFKALQKAEIIPPWK
>Mature_354_residues
MNNFLLRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKLKVPRGLASFILLLILIGVIG
SLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIRMYYISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFA
TKLPNFFFMTLITLVATFFISKDKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIG
FDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIEPKIVGQSIGLHPLVTLLSMF
IGVKLFGAIGLVIGPVFVVVFKALQKAEIIPPWK

Specific function: Unknown

COG id: COG0628

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014227
- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 39684; Mature: 39684

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNFLLRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KVPRGLASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYYISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SKDKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIG
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEIIPPWK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNNFLLRYGDIIKKTLLIVAVFIIFYLIIFKIIPFLMPFVVALLLAVIIDPGVNFLEKKL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KVPRGLASFILLLILIGVIGSLIAISITQLIYELSSLAEISTNYANTINDIILNLVDRIR
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MYYISLPPNITSLIESNMQSILNYVSLFAKNLATWLLNFATKLPNFFFMTLITLVATFFI
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
SKDKQLILDFIKRQIPSHWAQHAKNIQVDLLKTFFGYLRAVATIMLITFLEVSIGLAIIG
CCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FDYPFLLGLLVTIVDALPVLGSGAVMVPWALYNIIMKNYMVGIYLLILYGLVVVVRQMIE
CCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PKIVGQSIGLHPLVTLLSMFIGVKLFGAIGLVIGPVFVVVFKALQKAEIIPPWK
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7678007 [H]