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The map label for this gene is LytR [H]

Identifier: 20806567

GI number: 20806567

Start: 30406

End: 31620

Strand: Reverse

Name: LytR [H]

Synonym: TTE0026

Alternate gene names: 20806567

Gene position: 31620-30406 (Counterclockwise)

Preceding gene: 20806571

Following gene: 20806564

Centisome position: 1.18

GC content: 35.72

Gene sequence:

>1215_bases
ATGAAAAAAGTAGTAAAAATACTGGCCGTAATTTTTCTGGGAATAATACTTTCTGTAGGAATAGGTGCTTACATATTTTA
TAAAAATATACATGTACCTGCCGTACAAGAAGAAAATCCTATAGCTTCTTTGAACAATCCAGAAAAAAAAGAGGAAGACC
TTTCTTCAAAAAACGTCCTCGTTGTGGGAAGTGATGAAAACAATTTATCTGACACGTTATTTATAGCCAACTACAACCCT
AAAAATAAAACTATAAGCATTTTATCAATTCCAAGGGACACCTATTATCCTCGTCCAGGTTATAACTCTCCAGGGGATAA
AAAGATAAACGCCGCTTTTACCGAAGATGGAATTGAAGGAACAAAGAAAGCAGTAGAAAATTTACTCGGCATAAATATAG
ACCACTACATCATCATAGACTATGAAGGCTTTAAAAAAGTAATTGATACAATAGGCGGCGTAGAAGTAGATATTCCTTTT
GACATGAAGTATGACGACAACAGCGCTAATCCCCCTCTTCACATCAATTTAAAAAAAGGTCGTCAGGTGCTGGATGGAGA
AAAAGCAATCCAATTTGTAAGGTATAGACATGGTTACATTGATGGAGACTTAGGGAGAATAAAGGCTCAACATCAATTTT
TAGAAGCCTTGTTTAAAAAATTAACACAGCCTTCTACTCTGCCAAAGCTTCCTTCTCTAGCCATTGCTGTAAGCAAACAC
ATAAAAACAGACCTCACAGCAACAGAAATTGCCAAGTATGCTTATCAATTCGTAAAAGACAAGCCTTCTTCTATAAAATC
TTTTACTCTGCCTGGCGAACCGGATTATAAAGATGGAGTAAGCTATTTCTTCGCAGATAACACAAAAATTCCCGAAGTAG
TAGCAGAGTTTTTGGGAGATAAAACTACTTTCTCTTTTGACCCTTCTGAAATAGAGAAAAATAAGGCCATAAAAGTGGAA
GTATTAAATGGAACGAATATACCCGGTCTTGCTTCAAAATGCGCTGAAACTTTGAGAAAACAAGGTTTTGATGTAGTAAG
AATAGGAAATGTCGTGGGAACCACTTTTTCCACATCTCACGTATATGCCAGAACTGATGAGGAAAAGGCAAAAAAAGTAG
CAAACGCTCTTTCCATAATTTGTGTAGAAAAAGATATTACCCCTGATTCAAGCGTAGATGTAACTGTAATACTTGGAAAA
GACAAATCAAAATAA

Upstream 100 bases:

>100_bases
TTTCTCGAAAAAATTTTTATTCCAATGTTTTGGAGACTATAGATACGCGAATTTAAGGCTTTAATTTGACGTTACATGAA
AATCTCGAGGAGGTCAGAAG

Downstream 100 bases:

>100_bases
AAACAAAAAGCTGTGAAGTAAGTATGCTTCACAGCTTTTATTTTCTTAGTAAATGGCGGAGAAGGTGGGATTCGAACCCA
CGCGCCGGGGTTTTTCCCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 404

Protein sequence:

>404_residues
MKKVVKILAVIFLGIILSVGIGAYIFYKNIHVPAVQEENPIASLNNPEKKEEDLSSKNVLVVGSDENNLSDTLFIANYNP
KNKTISILSIPRDTYYPRPGYNSPGDKKINAAFTEDGIEGTKKAVENLLGINIDHYIIIDYEGFKKVIDTIGGVEVDIPF
DMKYDDNSANPPLHINLKKGRQVLDGEKAIQFVRYRHGYIDGDLGRIKAQHQFLEALFKKLTQPSTLPKLPSLAIAVSKH
IKTDLTATEIAKYAYQFVKDKPSSIKSFTLPGEPDYKDGVSYFFADNTKIPEVVAEFLGDKTTFSFDPSEIEKNKAIKVE
VLNGTNIPGLASKCAETLRKQGFDVVRIGNVVGTTFSTSHVYARTDEEKAKKVANALSIICVEKDITPDSSVDVTVILGK
DKSK

Sequences:

>Translated_404_residues
MKKVVKILAVIFLGIILSVGIGAYIFYKNIHVPAVQEENPIASLNNPEKKEEDLSSKNVLVVGSDENNLSDTLFIANYNP
KNKTISILSIPRDTYYPRPGYNSPGDKKINAAFTEDGIEGTKKAVENLLGINIDHYIIIDYEGFKKVIDTIGGVEVDIPF
DMKYDDNSANPPLHINLKKGRQVLDGEKAIQFVRYRHGYIDGDLGRIKAQHQFLEALFKKLTQPSTLPKLPSLAIAVSKH
IKTDLTATEIAKYAYQFVKDKPSSIKSFTLPGEPDYKDGVSYFFADNTKIPEVVAEFLGDKTTFSFDPSEIEKNKAIKVE
VLNGTNIPGLASKCAETLRKQGFDVVRIGNVVGTTFSTSHVYARTDEEKAKKVANALSIICVEKDITPDSSVDVTVILGK
DKSK
>Mature_404_residues
MKKVVKILAVIFLGIILSVGIGAYIFYKNIHVPAVQEENPIASLNNPEKKEEDLSSKNVLVVGSDENNLSDTLFIANYNP
KNKTISILSIPRDTYYPRPGYNSPGDKKINAAFTEDGIEGTKKAVENLLGINIDHYIIIDYEGFKKVIDTIGGVEVDIPF
DMKYDDNSANPPLHINLKKGRQVLDGEKAIQFVRYRHGYIDGDLGRIKAQHQFLEALFKKLTQPSTLPKLPSLAIAVSKH
IKTDLTATEIAKYAYQFVKDKPSSIKSFTLPGEPDYKDGVSYFFADNTKIPEVVAEFLGDKTTFSFDPSEIEKNKAIKVE
VLNGTNIPGLASKCAETLRKQGFDVVRIGNVVGTTFSTSHVYARTDEEKAKKVANALSIICVEKDITPDSSVDVTVILGK
DKSK

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 44666; Mature: 44666

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKVVKILAVIFLGIILSVGIGAYIFYKNIHVPAVQEENPIASLNNPEKKEEDLSSKNVL
CHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEE
VVGSDENNLSDTLFIANYNPKNKTISILSIPRDTYYPRPGYNSPGDKKINAAFTEDGIEG
EEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
TKKAVENLLGINIDHYIIIDYEGFKKVIDTIGGVEVDIPFDMKYDDNSANPPLHINLKKG
HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCC
RQVLDGEKAIQFVRYRHGYIDGDLGRIKAQHQFLEALFKKLTQPSTLPKLPSLAIAVSKH
CCHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IKTDLTATEIAKYAYQFVKDKPSSIKSFTLPGEPDYKDGVSYFFADNTKIPEVVAEFLGD
HHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCC
KTTFSFDPSEIEKNKAIKVEVLNGTNIPGLASKCAETLRKQGFDVVRIGNVVGTTFSTSH
CCEECCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEECCE
VYARTDEEKAKKVANALSIICVEKDITPDSSVDVTVILGKDKSK
EEEECCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKVVKILAVIFLGIILSVGIGAYIFYKNIHVPAVQEENPIASLNNPEKKEEDLSSKNVL
CHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHCCCCCCEE
VVGSDENNLSDTLFIANYNPKNKTISILSIPRDTYYPRPGYNSPGDKKINAAFTEDGIEG
EEECCCCCCCCEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEECCCCCHH
TKKAVENLLGINIDHYIIIDYEGFKKVIDTIGGVEVDIPFDMKYDDNSANPPLHINLKKG
HHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEECCC
RQVLDGEKAIQFVRYRHGYIDGDLGRIKAQHQFLEALFKKLTQPSTLPKLPSLAIAVSKH
CCHHCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
IKTDLTATEIAKYAYQFVKDKPSSIKSFTLPGEPDYKDGVSYFFADNTKIPEVVAEFLGD
HHCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHCCC
KTTFSFDPSEIEKNKAIKVEVLNGTNIPGLASKCAETLRKQGFDVVRIGNVVGTTFSTSH
CCEECCCHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCEECCE
VYARTDEEKAKKVANALSIICVEKDITPDSSVDVTVILGKDKSK
EEEECCHHHHHHHHHHHEEEEEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]