| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is Pgk
Identifier: 20095098
GI number: 20095098
Start: 1664704
End: 1665924
Strand: Reverse
Name: Pgk
Synonym: MK1662
Alternate gene names: 20095098
Gene position: 1665924-1664704 (Counterclockwise)
Preceding gene: 20095099
Following gene: 20095097
Centisome position: 98.29
GC content: 56.35
Gene sequence:
>1221_bases ATGTACGAAAACATATCTACTATGGACGATTTCGAGTTCGAAAATAAATGGGTCTTGTTACGAATTGATATAAATTCGAC GGTTATCGATGGTAAAATTGAGGACGATGAACGTATTAAAAGACATCTCGGGACGATCAAGGAGTTAATGGAACACGACG CCAGGGTGGCCATTCTAGCACACCAAGGAAGACCGGGTGAGGATGACTTCACGACACTGGAACCACATGCGGAAATCATG TCCGAAGAACTCGACAACTTCGAGTACGTGCCCGACGTGTTCGGACCCACCGCGAAGAAGAAGATTCGGTCGTTGGAGCC CGGCGAAGTTATCCTGCTGGAGAACGTGCGGTTCTATTCCGAGGAACGTATCAACCGGGACCCGGAGTGGCACGCACGCC GACATTTGGTGCGGAACCTGGCCCCGCTGTTCGACATTTTCGTGAACGACGCCTTCGCTGCGGCCCATCGCTCGAACGCT TCACTGGTCGGGTTCACTCGAAGACTTCCGTCTTGCGTCGGCCGTGTGATGGAGCGCGAGATCGAAGTCCTCGAAACCAT GGTCAGAGACGAGATGGAGGACGGCGTCTTCGTGATCGGAGGGTCCAAGATCGAGGATGCTATCAAGGTCATACGCCGAG CCATCGAGATGGACAACGTACGTCGCGTGTTACTGGGAGGTCTCGTGGGCAATCTCTTCCTTTGGGCCTCCGGAGTGGAT CTAGGGAAACCTTCACGGAAATTCCTGGATATGAAGGGTTACACGGGCTACTTGGACGAGGCACGGGAGCTCCTCGAGGA AGGTGACGACGTGATCCTCGTACCCGAAGACGTGGCTCTCAACCGCGGTGGAGAGCGCGAGGAGGTAGACGTGGACGAAC TGCCAGCGGACGCTCCCGTCTTCGACATCGGTACCGGAACGATCGAACGGTATCGCAAGGAGGTCGAAAGCGCGGGTATG GTGGTCGCGAACGGGCCGATGGGCGTGTACGAGGAACCCGGATTCGAGAAGGGAACGTACGAGGTCCTCAATGCTATCGC CGATTCGGAGGCTTTCTCCGTGATCGGAGGAGGCCACATAATTGCGGCGGCGAAAGCCTGTGGTGCTTATGACAGCATAG ATCACGTCAGCACGGGTGGCGGAGCGATGCTCCGAATGCTCGCCGGGGAGCGACTACCGGCCATAGATGCCATCCTCACT TGCCCGTTCTCGGGGTGCTGA
Upstream 100 bases:
>100_bases ACGGATTTACGGCTCAGCTCGCGAAAGAATTAGGAGTCGATGAATCAGATATGTGGGAACGGCACGCTAAAATACAATAA AATATTAGGGGCGAACAGTG
Downstream 100 bases:
>100_bases GGCGTGGTCGTCGTGGTGTACCACCGTCCCTTCAGCCACTTCCGCGTCAACCATGTGGCCCTTATCGCAGGCAACCTCGG GGCGAAGCTCCTTGTTTATT
Product: 3-phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 406; Mature: 406
Protein sequence:
>406_residues MYENISTMDDFEFENKWVLLRIDINSTVIDGKIEDDERIKRHLGTIKELMEHDARVAILAHQGRPGEDDFTTLEPHAEIM SEELDNFEYVPDVFGPTAKKKIRSLEPGEVILLENVRFYSEERINRDPEWHARRHLVRNLAPLFDIFVNDAFAAAHRSNA SLVGFTRRLPSCVGRVMEREIEVLETMVRDEMEDGVFVIGGSKIEDAIKVIRRAIEMDNVRRVLLGGLVGNLFLWASGVD LGKPSRKFLDMKGYTGYLDEARELLEEGDDVILVPEDVALNRGGEREEVDVDELPADAPVFDIGTGTIERYRKEVESAGM VVANGPMGVYEEPGFEKGTYEVLNAIADSEAFSVIGGGHIIAAAKACGAYDSIDHVSTGGGAMLRMLAGERLPAIDAILT CPFSGC
Sequences:
>Translated_406_residues MYENISTMDDFEFENKWVLLRIDINSTVIDGKIEDDERIKRHLGTIKELMEHDARVAILAHQGRPGEDDFTTLEPHAEIM SEELDNFEYVPDVFGPTAKKKIRSLEPGEVILLENVRFYSEERINRDPEWHARRHLVRNLAPLFDIFVNDAFAAAHRSNA SLVGFTRRLPSCVGRVMEREIEVLETMVRDEMEDGVFVIGGSKIEDAIKVIRRAIEMDNVRRVLLGGLVGNLFLWASGVD LGKPSRKFLDMKGYTGYLDEARELLEEGDDVILVPEDVALNRGGEREEVDVDELPADAPVFDIGTGTIERYRKEVESAGM VVANGPMGVYEEPGFEKGTYEVLNAIADSEAFSVIGGGHIIAAAKACGAYDSIDHVSTGGGAMLRMLAGERLPAIDAILT CPFSGC >Mature_406_residues MYENISTMDDFEFENKWVLLRIDINSTVIDGKIEDDERIKRHLGTIKELMEHDARVAILAHQGRPGEDDFTTLEPHAEIM SEELDNFEYVPDVFGPTAKKKIRSLEPGEVILLENVRFYSEERINRDPEWHARRHLVRNLAPLFDIFVNDAFAAAHRSNA SLVGFTRRLPSCVGRVMEREIEVLETMVRDEMEDGVFVIGGSKIEDAIKVIRRAIEMDNVRRVLLGGLVGNLFLWASGVD LGKPSRKFLDMKGYTGYLDEARELLEEGDDVILVPEDVALNRGGEREEVDVDELPADAPVFDIGTGTIERYRKEVESAGM VVANGPMGVYEEPGFEKGTYEVLNAIADSEAFSVIGGGHIIAAAKACGAYDSIDHVSTGGGAMLRMLAGERLPAIDAILT CPFSGC
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential)
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family
Homologues:
Organism=Homo sapiens, GI4505763, Length=421, Percent_Identity=28.5035629453682, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI31543397, Length=414, Percent_Identity=27.7777777777778, Blast_Score=154, Evalue=1e-37, Organism=Escherichia coli, GI1789294, Length=401, Percent_Identity=32.9177057356608, Blast_Score=197, Evalue=1e-51, Organism=Caenorhabditis elegans, GI17508823, Length=418, Percent_Identity=29.6650717703349, Blast_Score=161, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6319857, Length=408, Percent_Identity=30.3921568627451, Blast_Score=162, Evalue=6e-41, Organism=Drosophila melanogaster, GI24581203, Length=420, Percent_Identity=29.5238095238095, Blast_Score=164, Evalue=1e-40, Organism=Drosophila melanogaster, GI17136394, Length=428, Percent_Identity=28.9719626168224, Blast_Score=160, Evalue=2e-39,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): PGK_METKA (Q8TUU1)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614945.1 - ProteinModelPortal: Q8TUU1 - SMR: Q8TUU1 - GeneID: 1478257 - GenomeReviews: AE009439_GR - KEGG: mka:MK1662 - NMPDR: fig|190192.1.peg.1658 - HOGENOM: HBG453500 - OMA: PGKKDFT - BioCyc: MKAN190192:MK1662-MONOMER - BRENDA: 2.7.2.3 - GO: GO:0005737 - GO: GO:0006096 - HAMAP: MF_00145 - InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015824 - Gene3D: G3DSA:3.40.50.1270 - Gene3D: G3DSA:3.40.50.1260 - PANTHER: PTHR11406 - PIRSF: PIRSF000724 - PRINTS: PR00477
Pfam domain/function: PF00162 PGK; SSF53748 PGK
EC number: =2.7.2.3
Molecular weight: Translated: 45133; Mature: 45133
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: BINDING 38-38 BINDING 117-117 BINDING 157-157 BINDING 331-331
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYENISTMDDFEFENKWVLLRIDINSTVIDGKIEDDERIKRHLGTIKELMEHDARVAILA CCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE HQGRPGEDDFTTLEPHAEIMSEELDNFEYVPDVFGPTAKKKIRSLEPGEVILLENVRFYS ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCCCEEEECCCHHHH EERINRDPEWHARRHLVRNLAPLFDIFVNDAFAAAHRSNASLVGFTRRLPSCVGRVMERE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IEVLETMVRDEMEDGVFVIGGSKIEDAIKVIRRAIEMDNVRRVLLGGLVGNLFLWASGVD HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LGKPSRKFLDMKGYTGYLDEARELLEEGDDVILVPEDVALNRGGEREEVDVDELPADAPV CCCCCHHHEECCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHHCCCCCCE FDIGTGTIERYRKEVESAGMVVANGPMGVYEEPGFEKGTYEVLNAIADSEAFSVIGGGHI EECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHEEECCCHH IAAAKACGAYDSIDHVSTGGGAMLRMLAGERLPAIDAILTCPFSGC EEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCC >Mature Secondary Structure MYENISTMDDFEFENKWVLLRIDINSTVIDGKIEDDERIKRHLGTIKELMEHDARVAILA CCCCCCCCCCCCCCCCEEEEEEECCCEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEE HQGRPGEDDFTTLEPHAEIMSEELDNFEYVPDVFGPTAKKKIRSLEPGEVILLENVRFYS ECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCCCEEEECCCHHHH EERINRDPEWHARRHLVRNLAPLFDIFVNDAFAAAHRSNASLVGFTRRLPSCVGRVMERE HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH IEVLETMVRDEMEDGVFVIGGSKIEDAIKVIRRAIEMDNVRRVLLGGLVGNLFLWASGVD HHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LGKPSRKFLDMKGYTGYLDEARELLEEGDDVILVPEDVALNRGGEREEVDVDELPADAPV CCCCCHHHEECCCCCCHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCCHHHCCCCCCE FDIGTGTIERYRKEVESAGMVVANGPMGVYEEPGFEKGTYEVLNAIADSEAFSVIGGGHI EECCCHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHEEECCCHH IAAAKACGAYDSIDHVSTGGGAMLRMLAGERLPAIDAILTCPFSGC EEHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11930014