Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095097

Identifier: 20095097

GI number: 20095097

Start: 1664287

End: 1664700

Strand: Reverse

Name: 20095097

Synonym: MK1661

Alternate gene names: NA

Gene position: 1664700-1664287 (Counterclockwise)

Preceding gene: 20095098

Following gene: 20095096

Centisome position: 98.21

GC content: 59.9

Gene sequence:

>414_bases
GTGGTCGTCGTGGTGTACCACCGTCCCTTCAGCCACTTCCGCGTCAACCATGTGGCCCTTATCGCAGGCAACCTCGGGGC
GAAGCTCCTTGTTTATTCGGAACCGAAGTCACGTGCGGCCTTGGACGGTATCACACAGGTGCTGGAACACCCCGAGGAGA
GAGGTCGCGTTCCGGTGATGGTGGTCGACGACCTGGACGACGCCCTGGAAGTTGTTGATGGTCGGGTGGCGCTGCTAGAT
CCCTCGGCAGATGAAGGGATCAAGAAATTAAAGCCGTCAGACGTGCTGCTCACGGTCCCCGTGGAGCTACTCGAAGAGAT
CGATATAGAGCCTGATCTCACCGTCGGTGTCAGCGCTCCTGTCGGAGAGCTGGCCGCGCTGGCCGTCGTATTGTACGAGT
TGGGGGGAGCTTGA

Upstream 100 bases:

>100_bases
CGTCAGCACGGGTGGCGGAGCGATGCTCCGAATGCTCGCCGGGGAGCGACTACCGGCCATAGATGCCATCCTCACTTGCC
CGTTCTCGGGGTGCTGAGGC

Downstream 100 bases:

>100_bases
GTTGGTGAGAAGATCCAAAGGTTTCCGGAGTCGTACACGGAAAAAACTCCGAAAGAAGCCTAGAGAGCGCGGTCTTTCCC
CGTTGGGTCCGATGACGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD
PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA

Sequences:

>Translated_137_residues
MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD
PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA
>Mature_137_residues
MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD
PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA

Specific function: Unknown

COG id: COG4080

COG function: function code L; RecB-family nuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14666; Mature: 14666

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVM
CEEEEEECCCCHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHCCCCEE
VVDDLDDALEVVDGRVALLDPSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAP
EECCCHHHHHHHCCEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEECCCC
VGELAALAVVLYELGGA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVM
CEEEEEECCCCHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHCCCCEE
VVDDLDDALEVVDGRVALLDPSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAP
EECCCHHHHHHHCCEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEECCCC
VGELAALAVVLYELGGA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA