| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095097
Identifier: 20095097
GI number: 20095097
Start: 1664287
End: 1664700
Strand: Reverse
Name: 20095097
Synonym: MK1661
Alternate gene names: NA
Gene position: 1664700-1664287 (Counterclockwise)
Preceding gene: 20095098
Following gene: 20095096
Centisome position: 98.21
GC content: 59.9
Gene sequence:
>414_bases GTGGTCGTCGTGGTGTACCACCGTCCCTTCAGCCACTTCCGCGTCAACCATGTGGCCCTTATCGCAGGCAACCTCGGGGC GAAGCTCCTTGTTTATTCGGAACCGAAGTCACGTGCGGCCTTGGACGGTATCACACAGGTGCTGGAACACCCCGAGGAGA GAGGTCGCGTTCCGGTGATGGTGGTCGACGACCTGGACGACGCCCTGGAAGTTGTTGATGGTCGGGTGGCGCTGCTAGAT CCCTCGGCAGATGAAGGGATCAAGAAATTAAAGCCGTCAGACGTGCTGCTCACGGTCCCCGTGGAGCTACTCGAAGAGAT CGATATAGAGCCTGATCTCACCGTCGGTGTCAGCGCTCCTGTCGGAGAGCTGGCCGCGCTGGCCGTCGTATTGTACGAGT TGGGGGGAGCTTGA
Upstream 100 bases:
>100_bases CGTCAGCACGGGTGGCGGAGCGATGCTCCGAATGCTCGCCGGGGAGCGACTACCGGCCATAGATGCCATCCTCACTTGCC CGTTCTCGGGGTGCTGAGGC
Downstream 100 bases:
>100_bases GTTGGTGAGAAGATCCAAAGGTTTCCGGAGTCGTACACGGAAAAAACTCCGAAAGAAGCCTAGAGAGCGCGGTCTTTCCC CGTTGGGTCCGATGACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA
Sequences:
>Translated_137_residues MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA >Mature_137_residues MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVMVVDDLDDALEVVDGRVALLD PSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAPVGELAALAVVLYELGGA
Specific function: Unknown
COG id: COG4080
COG function: function code L; RecB-family nuclease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14666; Mature: 14666
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVM CEEEEEECCCCHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHCCCCEE VVDDLDDALEVVDGRVALLDPSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAP EECCCHHHHHHHCCEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEECCCC VGELAALAVVLYELGGA HHHHHHHHHHHHHHCCC >Mature Secondary Structure MVVVVYHRPFSHFRVNHVALIAGNLGAKLLVYSEPKSRAALDGITQVLEHPEERGRVPVM CEEEEEECCCCHHEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHCHHHHCCCCEE VVDDLDDALEVVDGRVALLDPSADEGIKKLKPSDVLLTVPVELLEEIDIEPDLTVGVSAP EECCCHHHHHHHCCEEEEECCCCHHHHHHCCCCCEEEECCHHHHHHCCCCCCCEEECCCC VGELAALAVVLYELGGA HHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA