| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095064
Identifier: 20095064
GI number: 20095064
Start: 1630003
End: 1631064
Strand: Direct
Name: 20095064
Synonym: MK1628
Alternate gene names: NA
Gene position: 1630003-1631064 (Clockwise)
Preceding gene: 20095060
Following gene: 20095065
Centisome position: 96.17
GC content: 61.21
Gene sequence:
>1062_bases ATGGCGGAGCGTATCGTTAGGGAAGTCCTTCGAGAGGCCCGGAGGCGCGGCGTGAGCGTGAGCGACTTGTTCAGCTCCGA GGGATGGGTCGTGAACGAGATCACCGACCGCATCTCGAGGGTGCTGGGATCCGTCGGGGCACCATCCGAGGACGTCCGAG AGAGCATCCTCGAGGAGACATCTTCCAAGCTCAAGTCACCCACGACGTACCTGAGCTCGATCGCCGAGACGGTATCTCAG GTTCTACCCTGGGGCGAGGAGGACGCTGATGCATTACCGGACCACGACTTCTCGGAGAAAGTGCTGGACCATCTGCTCGA AGGAGCGGAGGAGTTCGTGTGCCTCGCGAGCCCGTGGGTGTCGAGCCCTAAGGACCTAGTCGAAGAGGGTGTCAGATCGC TGAGGGGACTCTCCGACCGCGACTTGGAACTCTATCTCCTGGTCGCGGCAGGTGAGAACGAGCGGGAAGTCCTACTGGAG TGGGCCTCGCTAGGGTTCGAGGTCCGTGAGGCGGAAGGGCGGCGGGAAGGTGACCTAGGGATCCACTGCAAGGTGTACGC CAACGAGAAGCTGGCGCTCGGGGCCAGCTGGAACCTGACCGTCTCGAGCCTCCGACGCCTTCGGGCCATGCGCGAGGTGC ATACTATCAACCCGAAGGCGGACGACTGCGAGGTGTGTAACGCGAACTACGAGCAACTGGTTTCAGAGTTCAACTCGCAG TGGTCGGAAGCCAAGCAGAGGTTCTTCCGGGATGAGGGTCTGAAAGGTCCGGCGATTTTCGAGGTGCGCTGGGACGGCGA TCGGCCGACGGAGGTCGTCATCTACCGGGAGAACGGTGAGCGCTGGTTCACCGTCGAGCTAGAGGATAACCATGAGGGTT TCGTGTTCAACGAACGGGAGGGCCTACCGGTACGTCGAGGAGTACCGAGGGTTCACCGCTTTGACCTTCGAGGATCCCGA CGCCGCGGCCAAGATCGTTTATCCCTTCGTCGGACTCAAGCTCGAGAGGATCCGTCCGGAGCATCTGGATGTCGTAGAGC GGGACGTGAGATGGAAAGATAA
Upstream 100 bases:
>100_bases GCTCCAGTACGTGATCCTGGAGTACGTCCTCAGCACCGTCATTTCATTAGTCATCGAAAAGTATGTGGTGGACCCAACGA CCCGGCGCTAAGTCCGTCAG
Downstream 100 bases:
>100_bases CGCGAAGAAGTACAAACACCAGCTCACGGGCCGTCCCTACGACGGCGCACTCGTCGTCTGGGGCCTGGACCCGGACCCGA GGTCGGACTTCTACGTCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 352
Protein sequence:
>353_residues MAERIVREVLREARRRGVSVSDLFSSEGWVVNEITDRISRVLGSVGAPSEDVRESILEETSSKLKSPTTYLSSIAETVSQ VLPWGEEDADALPDHDFSEKVLDHLLEGAEEFVCLASPWVSSPKDLVEEGVRSLRGLSDRDLELYLLVAAGENEREVLLE WASLGFEVREAEGRREGDLGIHCKVYANEKLALGASWNLTVSSLRRLRAMREVHTINPKADDCEVCNANYEQLVSEFNSQ WSEAKQRFFRDEGLKGPAIFEVRWDGDRPTEVVIYRENGERWFTVELEDNHEGFVFNEREGLPVRRGVPRVHRFDLRGSR RRGQDRLSLRRTQAREDPSGASGCRRAGREMER
Sequences:
>Translated_353_residues MAERIVREVLREARRRGVSVSDLFSSEGWVVNEITDRISRVLGSVGAPSEDVRESILEETSSKLKSPTTYLSSIAETVSQ VLPWGEEDADALPDHDFSEKVLDHLLEGAEEFVCLASPWVSSPKDLVEEGVRSLRGLSDRDLELYLLVAAGENEREVLLE WASLGFEVREAEGRREGDLGIHCKVYANEKLALGASWNLTVSSLRRLRAMREVHTINPKADDCEVCNANYEQLVSEFNSQ WSEAKQRFFRDEGLKGPAIFEVRWDGDRPTEVVIYRENGERWFTVELEDNHEGFVFNEREGLPVRRGVPRVHRFDLRGSR RRGQDRLSLRRTQAREDPSGASGCRRAGREMER >Mature_352_residues AERIVREVLREARRRGVSVSDLFSSEGWVVNEITDRISRVLGSVGAPSEDVRESILEETSSKLKSPTTYLSSIAETVSQV LPWGEEDADALPDHDFSEKVLDHLLEGAEEFVCLASPWVSSPKDLVEEGVRSLRGLSDRDLELYLLVAAGENEREVLLEW ASLGFEVREAEGRREGDLGIHCKVYANEKLALGASWNLTVSSLRRLRAMREVHTINPKADDCEVCNANYEQLVSEFNSQW SEAKQRFFRDEGLKGPAIFEVRWDGDRPTEVVIYRENGERWFTVELEDNHEGFVFNEREGLPVRRGVPRVHRFDLRGSRR RGQDRLSLRRTQAREDPSGASGCRRAGREMER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40217; Mature: 40086
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERIVREVLREARRRGVSVSDLFSSEGWVVNEITDRISRVLGSVGAPSEDVRESILEET CHHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SSKLKSPTTYLSSIAETVSQVLPWGEEDADALPDHDFSEKVLDHLLEGAEEFVCLASPWV HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHEEEECCCCC SSPKDLVEEGVRSLRGLSDRDLELYLLVAAGENEREVLLEWASLGFEVREAEGRREGDLG CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCC IHCKVYANEKLALGASWNLTVSSLRRLRAMREVHTINPKADDCEVCNANYEQLVSEFNSQ EEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHH WSEAKQRFFRDEGLKGPAIFEVRWDGDRPTEVVIYRENGERWFTVELEDNHEGFVFNERE HHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCEEEECCC GLPVRRGVPRVHRFDLRGSRRRGQDRLSLRRTQAREDPSGASGCRRAGREMER CCCHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure AERIVREVLREARRRGVSVSDLFSSEGWVVNEITDRISRVLGSVGAPSEDVRESILEET HHHHHHHHHHHHHHCCCCHHHHHCCCCEEHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH SSKLKSPTTYLSSIAETVSQVLPWGEEDADALPDHDFSEKVLDHLLEGAEEFVCLASPWV HHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHEEEECCCCC SSPKDLVEEGVRSLRGLSDRDLELYLLVAAGENEREVLLEWASLGFEVREAEGRREGDLG CCCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCC IHCKVYANEKLALGASWNLTVSSLRRLRAMREVHTINPKADDCEVCNANYEQLVSEFNSQ EEEEEEECCEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHCCCCHHHHHHHHHHH WSEAKQRFFRDEGLKGPAIFEVRWDGDRPTEVVIYRENGERWFTVELEDNHEGFVFNERE HHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEEECCCEEEEEEEECCCCCEEEECCC GLPVRRGVPRVHRFDLRGSRRRGQDRLSLRRTQAREDPSGASGCRRAGREMER CCCHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA