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The map label for this gene is HyaD_2 [H]

Identifier: 20095060

GI number: 20095060

Start: 1626335

End: 1626904

Strand: Direct

Name: HyaD_2 [H]

Synonym: MK1624

Alternate gene names: 20095060

Gene position: 1626335-1626904 (Clockwise)

Preceding gene: 20095059

Following gene: 20095064

Centisome position: 95.95

GC content: 58.6

Gene sequence:

>570_bases
CTGTCTAAGGACAGTGTTAGAGCTGCTTCTACTGGACACACTCATGGGGCTGGCGTGGGCTTGCTGAGGTTCTTACAAAG
GCGCGTCCTCATCGTCGGGTGCGGGAACGAGTTGTTCGGAGATGACGGGTTCGGACCAGCAGTGATCAAAGAAATCGAGC
GCCGTGGATGGGAGCATCCGGACGTGGAGATCTTGGACGCAGGAGCGGGCGCTCCGCAGAACGTGTTCTCGCTAATCGAC
GAGGATTCGAAGGTCGAGTACATGGTAGTGGTCGACGCGGTGGACGTGGGAGCGGAGCCGGGAACACTACTGGAGTTCGG
CCCAGAGGATCTCGATCCCAACTGTCGCATAGTACCAGTTGACGCCCACGGATGGAGCATAGAATCCGCACTGCTGGACC
TCAACGAGAGGATCGGTATCGACTTCCGGATACTGGGATGCCAGGTGAAAGAGCTACCGATTCCCGAGGTCCAACCTGGT
CTCTCCGATCCCGTCCGTAAGGCGGTACCGAAAGCCGCCGACCGTGCGATCGAGCTCGCCGAGCGTTACTTGGGTGAAAA
GACTCGATAG

Upstream 100 bases:

>100_bases
CGGTCCTGTCGGCCTTGAGATTAGACTCCGAATCGAGCCGAACGACGCTCGAGGAAATCACGAAGTCCGCCGTGAAGAAC
TTCATTGAAGCCCTAGGTCC

Downstream 100 bases:

>100_bases
ACCAGTCCGCGGTACCTGACGCTGAGTGACCTAGCTCCCGAAGGACACGCCCGCACGCACTCTCCGCACCCTAAGCACTC
ACCGTCCGGTGATGGACAGA

Product: Ni,Fe-hydrogenase maturation factor

Products: reduced coenzyme F420

Alternate protein names: Putative coenzyme F420 hydrogenase-processing subunit [H]

Number of amino acids: Translated: 189; Mature: 188

Protein sequence:

>189_residues
MSKDSVRAASTGHTHGAGVGLLRFLQRRVLIVGCGNELFGDDGFGPAVIKEIERRGWEHPDVEILDAGAGAPQNVFSLID
EDSKVEYMVVVDAVDVGAEPGTLLEFGPEDLDPNCRIVPVDAHGWSIESALLDLNERIGIDFRILGCQVKELPIPEVQPG
LSDPVRKAVPKAADRAIELAERYLGEKTR

Sequences:

>Translated_189_residues
MSKDSVRAASTGHTHGAGVGLLRFLQRRVLIVGCGNELFGDDGFGPAVIKEIERRGWEHPDVEILDAGAGAPQNVFSLID
EDSKVEYMVVVDAVDVGAEPGTLLEFGPEDLDPNCRIVPVDAHGWSIESALLDLNERIGIDFRILGCQVKELPIPEVQPG
LSDPVRKAVPKAADRAIELAERYLGEKTR
>Mature_188_residues
SKDSVRAASTGHTHGAGVGLLRFLQRRVLIVGCGNELFGDDGFGPAVIKEIERRGWEHPDVEILDAGAGAPQNVFSLIDE
DSKVEYMVVVDAVDVGAEPGTLLEFGPEDLDPNCRIVPVDAHGWSIESALLDLNERIGIDFRILGCQVKELPIPEVQPGL
SDPVRKAVPKAADRAIELAERYLGEKTR

Specific function: Protease Involved In The C-Terminal Processing Of Hyab, The Large Subunit Of Hydrogenase 1 (Potential). [C]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004411
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 1.12.98.1

Molecular weight: Translated: 20476; Mature: 20345

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKDSVRAASTGHTHGAGVGLLRFLQRRVLIVGCGNELFGDDGFGPAVIKEIERRGWEHP
CCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCHHCCCCCCCHHHHHHHHHCCCCCC
DVEILDAGAGAPQNVFSLIDEDSKVEYMVVVDAVDVGAEPGTLLEFGPEDLDPNCRIVPV
CEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCCEEEEE
DAHGWSIESALLDLNERIGIDFRILGCQVKELPIPEVQPGLSDPVRKAVPKAADRAIELA
CCCCCCHHHHHHHHHHHCCCEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERYLGEKTR
HHHHCCCCC
>Mature Secondary Structure 
SKDSVRAASTGHTHGAGVGLLRFLQRRVLIVGCGNELFGDDGFGPAVIKEIERRGWEHP
CCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCHHCCCCCCCHHHHHHHHHCCCCCC
DVEILDAGAGAPQNVFSLIDEDSKVEYMVVVDAVDVGAEPGTLLEFGPEDLDPNCRIVPV
CEEEEECCCCCHHHHHHHHCCCCCEEEEEEEEEEECCCCCCCEEECCCCCCCCCCEEEEE
DAHGWSIESALLDLNERIGIDFRILGCQVKELPIPEVQPGLSDPVRKAVPKAADRAIELA
CCCCCCHHHHHHHHHHHCCCEEEEECEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
ERYLGEKTR
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2; coenzyme F420

Specific reaction: H2 + coenzyme F420 = reduced coenzyme F420

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]