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The map label for this gene is 20095055

Identifier: 20095055

GI number: 20095055

Start: 1623644

End: 1623997

Strand: Reverse

Name: 20095055

Synonym: MK1619

Alternate gene names: NA

Gene position: 1623997-1623644 (Counterclockwise)

Preceding gene: 20095056

Following gene: 20095054

Centisome position: 95.81

GC content: 56.5

Gene sequence:

>354_bases
ATGACCGACCCCGAGCTCGAGCGCATCCGGCGTAAGAAGATTATGGAACTCCAACGCAAGCTGGAGGAGTCGCAGGAGAA
GAAGGTCGAGGAAGAGAGGGAGAAGAAAGCACTGGAGGAAGCCCAGCGCCGGGCGATGCTTCGTAGGATCCTGACCCCAG
AAGCCCGGGAACGTCTGGCTCGAGTCCGGCTCGCCAGGCCACAGCTGGCTCAGGCGGTTGAAAATTACCTACTACAGCTG
GCTCAAACGGGTCAGTTGAAGGAGAAGATCGACGAGGATCAACTCAAGAGAATCCTGAAACAGGTCTCGGACGCTACGCG
AAAGGAGTATCGGATAAGGTTCAAACGGAAGTGA

Upstream 100 bases:

>100_bases
TCGTCGACTCAACCGCCCATGAGATCGCCAAGGAGAAGGGATACACGGATAAATTCACGTCTCCCATCTAACCGCCGATC
GGGGGTAGGAGGTCGCCACT

Downstream 100 bases:

>100_bases
GGGGGGTAGTCGATTGGCCCGTGTGAAACCACTGGGTAAGAAACTCCGTATGGCCAAGGCGATCAAGCAGAACCGTCGCG
TCCCACCGTGGGTTGTGGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLARVRLARPQLAQAVENYLLQL
AQTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK

Sequences:

>Translated_117_residues
MTDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLARVRLARPQLAQAVENYLLQL
AQTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK
>Mature_116_residues
TDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLARVRLARPQLAQAVENYLLQLA
QTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK

Specific function: Unknown

COG id: COG2118

COG function: function code R; DNA-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PDCD5 family

Homologues:

Organism=Homo sapiens, GI4759224, Length=117, Percent_Identity=39.3162393162393, Blast_Score=79, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1619_METKA (Q8TUY2)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614902.1
- ProteinModelPortal:   Q8TUY2
- SMR:   Q8TUY2
- GeneID:   1478214
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1619
- NMPDR:   fig|190192.1.peg.1615
- HOGENOM:   HBG726401
- OMA:   LYQAGQI
- ProtClustDB:   PRK04239
- BioCyc:   MKAN190192:MK1619-MONOMER
- HAMAP:   MF_00026
- InterPro:   IPR022889
- InterPro:   IPR002836
- Gene3D:   G3DSA:1.10.8.140
- PANTHER:   PTHR10840
- PIRSF:   PIRSF015730

Pfam domain/function: PF01984 dsDNA_bind; SSF46950 TFAR19-related

EC number: NA

Molecular weight: Translated: 14238; Mature: 14107

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RVRLARPQLAQAVENYLLQLAQTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRAMLRRILTPEARERLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
RVRLARPQLAQAVENYLLQLAQTGQLKEKIDEDQLKRILKQVSDATRKEYRIRFKRK
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014