| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is RPL31A
Identifier: 20095053
GI number: 20095053
Start: 1623199
End: 1623459
Strand: Reverse
Name: RPL31A
Synonym: MK1617
Alternate gene names: 20095053
Gene position: 1623459-1623199 (Counterclockwise)
Preceding gene: 20095054
Following gene: 20095052
Centisome position: 95.78
GC content: 60.15
Gene sequence:
>261_bases GTGGCTGAAGTCGTCGACGAGCGTGTTTACACCGTACCGCTTCGCGACGCGAAGAAGGCACCGCTCAAGAAGCGCGCACC GAGGGCCGTCAAGGCGCTTAGGCAGTTCATCGAACGACACATGAAGGCGGAGGAGGTCAGGATCGGCAACGACGTGAACG AGAAGATCTGGGAGCGGGGCATCAAGAAGCCACCCTCTAAGATCAGAGTTCGCGCCGTGAAGTACGCGGACGGTACCGTC GAAGTCAGGCTGGCGGAGTAA
Upstream 100 bases:
>100_bases ACCGTGGGTTGTGGCTAAAACGGGTGGACGCGTCATCGACAACCCGAAGCGTAGGCACTGGAGGCGTAGCAAGCTGAAGC CGTAATGGGGGTATTGGGAC
Downstream 100 bases:
>100_bases GCATGACCGTAGTCAAGGCCTCGGTCCACGGGGACCCCAACATCGGGGCGTGGATAGCGGCCTCCGAGGAATACGCCGTC GTCGCTCCCAAAGTCCCGGA
Product: 50S ribosomal protein L31e
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 86; Mature: 85
Protein sequence:
>86_residues MAEVVDERVYTVPLRDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGIKKPPSKIRVRAVKYADGTV EVRLAE
Sequences:
>Translated_86_residues MAEVVDERVYTVPLRDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGIKKPPSKIRVRAVKYADGTV EVRLAE >Mature_85_residues AEVVDERVYTVPLRDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERGIKKPPSKIRVRAVKYADGTVE VRLAE
Specific function: Unknown
COG id: COG2097
COG function: function code J; Ribosomal protein L31E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribosomal protein L31e family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): RL31_METKA (Q8TUY4)
Other databases:
- EMBL: AE009439 - RefSeq: NP_614900.1 - ProteinModelPortal: Q8TUY4 - SMR: Q8TUY4 - GeneID: 1478212 - GenomeReviews: AE009439_GR - KEGG: mka:MK1617 - NMPDR: fig|190192.1.peg.1613 - HOGENOM: HBG553310 - OMA: MEEERIY - ProtClustDB: PRK01192 - BioCyc: MKAN190192:MK1617-MONOMER - GO: GO:0005840 - GO: GO:0006412 - HAMAP: MF_00410 - InterPro: IPR000054 - InterPro: IPR020052 - Gene3D: G3DSA:3.10.440.10 - PANTHER: PTHR10956 - ProDom: PD006030
Pfam domain/function: PF01198 Ribosomal_L31e; SSF54575 Ribosomal_L31e
EC number: NA
Molecular weight: Translated: 9950; Mature: 9819
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: PS01144 RIBOSOMAL_L31E
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEVVDERVYTVPLRDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERG CCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IKKPPSKIRVRAVKYADGTVEVRLAE CCCCCCHHEEEEEEECCCEEEEEECC >Mature Secondary Structure AEVVDERVYTVPLRDAKKAPLKKRAPRAVKALRQFIERHMKAEEVRIGNDVNEKIWERG CCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH IKKPPSKIRVRAVKYADGTVEVRLAE CCCCCCHHEEEEEEECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11930014