| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20095041
Identifier: 20095041
GI number: 20095041
Start: 1614640
End: 1615353
Strand: Direct
Name: 20095041
Synonym: MK1605
Alternate gene names: NA
Gene position: 1614640-1615353 (Clockwise)
Preceding gene: 20095040
Following gene: 20095059
Centisome position: 95.26
GC content: 58.96
Gene sequence:
>714_bases ATGACCTCGACGGAAAAGGCCAGGATCCGAAGGATGGTGTGGGAAGAGCTCGAGGAGTCCGGCGAGGCCGCGCCCCCGTT CCCCGTCGAGGGCAGGATCCCGAACTTCAAGGGCGCCTTAGTAGCGGCTCGACGGCTCACTTCGACGCCCGAATACGAGG AAGCCGAAGTGGTGAAGGTAAATCCGGACTCACCCCAACGACCTGTACGTGAACGAGCGCTTCGCGACGGTAAGATCCTG ATAATGCCGACACCGAGGCTCAAACGTGGCTTCCTCGTCGTGAAGAACCCTAAAGATCCTCGACGTGCCTCAACGATTAG GGGAGCTTTCCAGGAAGGGGAGCTAACGATGCCGGACGAACTCCCCGCGGTCGACTTGGTAGTGGCCGGATCCGTGGCGG TAGCTCCGGACGGTGCCAGGGTTGGAAAAGGTGGCGGCTACTTCGACTTGGAGTGGGGGATTTTGGCGCAATTGGATCTC GTAGATGAAGACACTCCCATACACACTACCGTTCACGATATCCAGGTACTTCCACCGGGAGAGATACCGATGGAAGAGCA CGACGTACCGGTAGACGTCATCCACACGCCGACGGGGACGACGGAGTGCGTTCGACGCTACGAGAAGCCCGGGGGTCTCT TGGAAGACCGCATCGACGAGAAAATTAGGGAGATAAGGTGGTTGCGGGAGTACGTTTCAGCCGGAAGCACGTAA
Upstream 100 bases:
>100_bases AGATCACTGACCTTCATCACTCGCAAAATCACTCGAGATCCGAAGGCAAAAACACCCTATCTCCACTTAAAAGTGAGGCT TCTCAAGGGGTTGTGGGCAC
Downstream 100 bases:
>100_bases CGCGTCGGCAAGTTCGGCCAAGGCCTTCTCGAGTTCGTCCTCTCCGATCACGAGCGGAGGTACTAGTCTGATCACGTCAC CAGAGGTTACGTTCACGAGA
Product: 5-formyltetrahydrofolate cyclo-ligase
Products: NA
Alternate protein names: 5-Formyltetrahydrofolate Cyclo-Ligase-Related Protein; 5-Formyltetrahydrofolate Cyclo-Ligase-Like
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MTSTEKARIRRMVWEELEESGEAAPPFPVEGRIPNFKGALVAARRLTSTPEYEEAEVVKVNPDSPQRPVRERALRDGKIL IMPTPRLKRGFLVVKNPKDPRRASTIRGAFQEGELTMPDELPAVDLVVAGSVAVAPDGARVGKGGGYFDLEWGILAQLDL VDEDTPIHTTVHDIQVLPPGEIPMEEHDVPVDVIHTPTGTTECVRRYEKPGGLLEDRIDEKIREIRWLREYVSAGST
Sequences:
>Translated_237_residues MTSTEKARIRRMVWEELEESGEAAPPFPVEGRIPNFKGALVAARRLTSTPEYEEAEVVKVNPDSPQRPVRERALRDGKIL IMPTPRLKRGFLVVKNPKDPRRASTIRGAFQEGELTMPDELPAVDLVVAGSVAVAPDGARVGKGGGYFDLEWGILAQLDL VDEDTPIHTTVHDIQVLPPGEIPMEEHDVPVDVIHTPTGTTECVRRYEKPGGLLEDRIDEKIREIRWLREYVSAGST >Mature_236_residues TSTEKARIRRMVWEELEESGEAAPPFPVEGRIPNFKGALVAARRLTSTPEYEEAEVVKVNPDSPQRPVRERALRDGKILI MPTPRLKRGFLVVKNPKDPRRASTIRGAFQEGELTMPDELPAVDLVVAGSVAVAPDGARVGKGGGYFDLEWGILAQLDLV DEDTPIHTTVHDIQVLPPGEIPMEEHDVPVDVIHTPTGTTECVRRYEKPGGLLEDRIDEKIREIRWLREYVSAGST
Specific function: Unknown
COG id: COG0212
COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI226823322, Length=235, Percent_Identity=40.4255319148936, Blast_Score=144, Evalue=9e-35, Organism=Homo sapiens, GI226823324, Length=235, Percent_Identity=40.4255319148936, Blast_Score=144, Evalue=9e-35, Organism=Homo sapiens, GI226823319, Length=235, Percent_Identity=38.7234042553192, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI116875838, Length=235, Percent_Identity=38.7234042553192, Blast_Score=136, Evalue=2e-32, Organism=Homo sapiens, GI226823326, Length=223, Percent_Identity=39.0134529147982, Blast_Score=128, Evalue=5e-30, Organism=Drosophila melanogaster, GI161078016, Length=225, Percent_Identity=30.6666666666667, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI21355167, Length=227, Percent_Identity=30.3964757709251, Blast_Score=81, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26359; Mature: 26228
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSTEKARIRRMVWEELEESGEAAPPFPVEGRIPNFKGALVAARRLTSTPEYEEAEVVKV CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE NPDSPQRPVRERALRDGKILIMPTPRLKRGFLVVKNPKDPRRASTIRGAFQEGELTMPDE CCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC LPAVDLVVAGSVAVAPDGARVGKGGGYFDLEWGILAQLDLVDEDTPIHTTVHDIQVLPPG CCEEEEEEECCEEECCCCCEECCCCCEEEECCCEEEEEEECCCCCCCEEEEEEEEEECCC EIPMEEHDVPVDVIHTPTGTTECVRRYEKPGGLLEDRIDEKIREIRWLREYVSAGST CCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TSTEKARIRRMVWEELEESGEAAPPFPVEGRIPNFKGALVAARRLTSTPEYEEAEVVKV CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEE NPDSPQRPVRERALRDGKILIMPTPRLKRGFLVVKNPKDPRRASTIRGAFQEGELTMPDE CCCCCCCHHHHHHHCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCC LPAVDLVVAGSVAVAPDGARVGKGGGYFDLEWGILAQLDLVDEDTPIHTTVHDIQVLPPG CCEEEEEEECCEEECCCCCEECCCCCEEEECCCEEEEEEECCCCCCCEEEEEEEEEECCC EIPMEEHDVPVDVIHTPTGTTECVRRYEKPGGLLEDRIDEKIREIRWLREYVSAGST CCCCCCCCCCEEEEECCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA