| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095059
Identifier: 20095059
GI number: 20095059
Start: 1625166
End: 1626401
Strand: Direct
Name: 20095059
Synonym: MK1623
Alternate gene names: NA
Gene position: 1625166-1626401 (Clockwise)
Preceding gene: 20095041
Following gene: 20095060
Centisome position: 95.88
GC content: 60.11
Gene sequence:
>1236_bases CTGCGCAACAGTAACACCCCCGAACGAGGGGATTCGACCTTGCACACCTGGCTCCTGCTATGGCTCCTGCTACCGATGAC ACCCGCGCAGGCTGATCCGACGAGTCACTACCTGGAAGTCCATCCGGATACCGTCCCGGTGACGCCCGAGGGGAGTCCGC TAGTTCCTGCCTACGTGGAACTAACCGACGAGGGGAAGGAGGCAGCCCTCTCCCTCCTCGAGCGTCTCGGAATCCCGTCG GATGAGGCCGCGGTGGGATACCTGGCCGACGTTTTCGTCGGGGAGTCGTGCCATGGAGGCACTCGGTGCCTCGTAGTCTA CAATCCTCAGGACACCACCGTCGAGGTGCGACCGTGGGAGGAAGATCGGCTCCCCCTAAGGTTACCACCGCTCCGACTGG ACGACCATCTCACGGAACTGCTCCTGTGTCTACCGGTACGGGAGCAGATCACCCTTCAACCGGCCGTTCTCGAGCTCGGT TGGAACCTCGAAATGATGCAGCGATGCACCAAGGCCGTCCGCCTGCACAAATTCGGTGAGCCGACGGCCGTGATCGCGGT TTACGTACCCACCGAAACGGCCGCTCTCCGGGCGTTCGAATCGTTACTCCCCGACCCACGGAACGTTGCCCGAGCCATGC TCGAGCGTCTCTCCTCCGAGGTCCGCGATGCGATCGATGAGTATCTCGTGCGAGACCGGCTGGAAAGGTTGGTGAAATCG AGGCTAGGGAGTGACGTCTACGATCGGGTCAGAGAATACTTCTCTTCGATGATACATTTGACGGTCAGCAAGATCGAGGA GCTGTACGACGAGAGGGTCCTCCCAGCACTGATCGAATGGTGTGCTGCCATCGTGCGGTACGTCGAAACCTCACTCATTA CCGCGTTCGCACTTCTGTACCCCGACAACCCGAGCGCAGACGTCCTCGAGCGCCGGGTGGCCGTGTACAACTCTCCCTAC TTCCAAATACTCCGAGACTGGCTGCTCGAACCTTCCTACACGGCCTGGAAGAGCGTTCTGTGCGATCTCGCCGTCACCGT GGCCGATTCGATCTTCGAGGCAGCACGACCGGTCCTGTCGGCCTTGAGATTAGACTCCGAATCGAGCCGAACGACGCTCG AGGAAATCACGAAGTCCGCCGTGAAGAACTTCATTGAAGCCCTAGGTCCCTGTCTAAGGACAGTGTTAGAGCTGCTTCTA CTGGACACACTCATGGGGCTGGCGTGGGCTTGCTGA
Upstream 100 bases:
>100_bases CCTCCTGGCGAGCTCCACGTACCTCCGTGCCCTGTCCGGGTCCTCGTAGTACACCGTCCGGGCCAGCCTCAACAGCCGCT CAGCGCGCTCCAGGGCTATC
Downstream 100 bases:
>100_bases GGTTCTTACAAAGGCGCGTCCTCATCGTCGGGTGCGGGAACGAGTTGTTCGGAGATGACGGGTTCGGACCAGCAGTGATC AAAGAAATCGAGCGCCGTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MRNSNTPERGDSTLHTWLLLWLLLPMTPAQADPTSHYLEVHPDTVPVTPEGSPLVPAYVELTDEGKEAALSLLERLGIPS DEAAVGYLADVFVGESCHGGTRCLVVYNPQDTTVEVRPWEEDRLPLRLPPLRLDDHLTELLLCLPVREQITLQPAVLELG WNLEMMQRCTKAVRLHKFGEPTAVIAVYVPTETAALRAFESLLPDPRNVARAMLERLSSEVRDAIDEYLVRDRLERLVKS RLGSDVYDRVREYFSSMIHLTVSKIEELYDERVLPALIEWCAAIVRYVETSLITAFALLYPDNPSADVLERRVAVYNSPY FQILRDWLLEPSYTAWKSVLCDLAVTVADSIFEAARPVLSALRLDSESSRTTLEEITKSAVKNFIEALGPCLRTVLELLL LDTLMGLAWAC
Sequences:
>Translated_411_residues MRNSNTPERGDSTLHTWLLLWLLLPMTPAQADPTSHYLEVHPDTVPVTPEGSPLVPAYVELTDEGKEAALSLLERLGIPS DEAAVGYLADVFVGESCHGGTRCLVVYNPQDTTVEVRPWEEDRLPLRLPPLRLDDHLTELLLCLPVREQITLQPAVLELG WNLEMMQRCTKAVRLHKFGEPTAVIAVYVPTETAALRAFESLLPDPRNVARAMLERLSSEVRDAIDEYLVRDRLERLVKS RLGSDVYDRVREYFSSMIHLTVSKIEELYDERVLPALIEWCAAIVRYVETSLITAFALLYPDNPSADVLERRVAVYNSPY FQILRDWLLEPSYTAWKSVLCDLAVTVADSIFEAARPVLSALRLDSESSRTTLEEITKSAVKNFIEALGPCLRTVLELLL LDTLMGLAWAC >Mature_411_residues MRNSNTPERGDSTLHTWLLLWLLLPMTPAQADPTSHYLEVHPDTVPVTPEGSPLVPAYVELTDEGKEAALSLLERLGIPS DEAAVGYLADVFVGESCHGGTRCLVVYNPQDTTVEVRPWEEDRLPLRLPPLRLDDHLTELLLCLPVREQITLQPAVLELG WNLEMMQRCTKAVRLHKFGEPTAVIAVYVPTETAALRAFESLLPDPRNVARAMLERLSSEVRDAIDEYLVRDRLERLVKS RLGSDVYDRVREYFSSMIHLTVSKIEELYDERVLPALIEWCAAIVRYVETSLITAFALLYPDNPSADVLERRVAVYNSPY FQILRDWLLEPSYTAWKSVLCDLAVTVADSIFEAARPVLSALRLDSESSRTTLEEITKSAVKNFIEALGPCLRTVLELLL LDTLMGLAWAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46312; Mature: 46312
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNSNTPERGDSTLHTWLLLWLLLPMTPAQADPTSHYLEVHPDTVPVTPEGSPLVPAYVE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCHHEE LTDEGKEAALSLLERLGIPSDEAAVGYLADVFVGESCHGGTRCLVVYNPQDTTVEVRPWE ECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCC EDRLPLRLPPLRLDDHLTELLLCLPVREQITLQPAVLELGWNLEMMQRCTKAVRLHKFGE CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC PTAVIAVYVPTETAALRAFESLLPDPRNVARAMLERLSSEVRDAIDEYLVRDRLERLVKS CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGSDVYDRVREYFSSMIHLTVSKIEELYDERVLPALIEWCAAIVRYVETSLITAFALLY HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDNPSADVLERRVAVYNSPYFQILRDWLLEPSYTAWKSVLCDLAVTVADSIFEAARPVLS CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLDSESSRTTLEEITKSAVKNFIEALGPCLRTVLELLLLDTLMGLAWAC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRNSNTPERGDSTLHTWLLLWLLLPMTPAQADPTSHYLEVHPDTVPVTPEGSPLVPAYVE CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCEECCCCCCCCCCCHHEE LTDEGKEAALSLLERLGIPSDEAAVGYLADVFVGESCHGGTRCLVVYNPQDTTVEVRPWE ECCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCC EDRLPLRLPPLRLDDHLTELLLCLPVREQITLQPAVLELGWNLEMMQRCTKAVRLHKFGE CCCCCCCCCCCCHHHHHHHHHHHHCCHHHHCCCHHHHHHCCCHHHHHHHHHHHHHHHCCC PTAVIAVYVPTETAALRAFESLLPDPRNVARAMLERLSSEVRDAIDEYLVRDRLERLVKS CCEEEEEEECCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLGSDVYDRVREYFSSMIHLTVSKIEELYDERVLPALIEWCAAIVRYVETSLITAFALLY HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PDNPSADVLERRVAVYNSPYFQILRDWLLEPSYTAWKSVLCDLAVTVADSIFEAARPVLS CCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALRLDSESSRTTLEEITKSAVKNFIEALGPCLRTVLELLLLDTLMGLAWAC HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA