Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

Click here to switch to the map view.

The map label for this gene is 20095035

Identifier: 20095035

GI number: 20095035

Start: 1608218

End: 1608949

Strand: Direct

Name: 20095035

Synonym: MK1599

Alternate gene names: NA

Gene position: 1608218-1608949 (Clockwise)

Preceding gene: 20095034

Following gene: 20095039

Centisome position: 94.88

GC content: 58.33

Gene sequence:

>732_bases
CTGAAAGTTCTCGCGCTCCTGGTGCTGGCGTGGCTAGCGTACGCGTTTCTAGGTTTCGTGAAATTCTACGCGACGACGGG
TTGCCTGCCGTTAGGACGACTGGCCTTCGTGAAATTACATGATCCGGACATAAGACCGGGAGGTCTTCACGAGATGGTCG
CCACCAACGTCGCGCACACCCTCGGATACTCAGCGGTCACGATCGTCCATAACGCGGGTAATGAGCGCATGTACGGCTCG
TGGACCGAGAAGAACGGCGTACTCGTGTGGAACATCGCGGCGCTAGACCCTCGTGGGAACCGAGCGTCGGTGGACTGGCA
CGGTGCGCTCAGGGAGCTGGTCTTCGCGGACAGGTTGAGGACTGCCACCTGGGTTCACGATGGGCCGATCGGCGGGCCAC
GATTCCCCAAGAACTCCGTGATCTTCTGGCACGGGACCGTGAGGAACGGTTTCCCGCTCCTCTACGGAGGGTGTGGGTGC
GAGCCGTACTACTACATCCTCGCGAACTATGGGAACGTCCCTTTCGCGATCACGGCAACTGTGCTAGGGTGGTTCACACC
GTTCCTGATATCACCGCTGGAAGCTTTTTGGGAGCTCTCGCACTACAAGAGACTCCAGTACGAGTACCTGAAGAAGGTGA
ACGGGATCAGGCTGATAAACCTGAAAAACTATGAGGGGACGTCGGCGACGCCTACTGATTCGATATCGGGTAATTCGGTG
CCTCGTCCGTGA

Upstream 100 bases:

>100_bases
GACCGGACCGTCATATAGCCGCCTCTCACTAGACCGTGCACCACCGTGCGGGTAAGCACGCTGTCCTAAGGGGGTCGTCG
CCGTGGTGGGAGTGATTCCG

Downstream 100 bases:

>100_bases
TGGCGATGTCGTGTGGGTGACTCTCCTCGTACCCGGCTCGAGTGATCCGTACGAACCTCGCCTTCTTCTTCATTTCCTCA
ATGTTCTTGGCGCCGACGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 243; Mature: 243

Protein sequence:

>243_residues
MKVLALLVLAWLAYAFLGFVKFYATTGCLPLGRLAFVKLHDPDIRPGGLHEMVATNVAHTLGYSAVTIVHNAGNERMYGS
WTEKNGVLVWNIAALDPRGNRASVDWHGALRELVFADRLRTATWVHDGPIGGPRFPKNSVIFWHGTVRNGFPLLYGGCGC
EPYYYILANYGNVPFAITATVLGWFTPFLISPLEAFWELSHYKRLQYEYLKKVNGIRLINLKNYEGTSATPTDSISGNSV
PRP

Sequences:

>Translated_243_residues
MKVLALLVLAWLAYAFLGFVKFYATTGCLPLGRLAFVKLHDPDIRPGGLHEMVATNVAHTLGYSAVTIVHNAGNERMYGS
WTEKNGVLVWNIAALDPRGNRASVDWHGALRELVFADRLRTATWVHDGPIGGPRFPKNSVIFWHGTVRNGFPLLYGGCGC
EPYYYILANYGNVPFAITATVLGWFTPFLISPLEAFWELSHYKRLQYEYLKKVNGIRLINLKNYEGTSATPTDSISGNSV
PRP
>Mature_243_residues
MKVLALLVLAWLAYAFLGFVKFYATTGCLPLGRLAFVKLHDPDIRPGGLHEMVATNVAHTLGYSAVTIVHNAGNERMYGS
WTEKNGVLVWNIAALDPRGNRASVDWHGALRELVFADRLRTATWVHDGPIGGPRFPKNSVIFWHGTVRNGFPLLYGGCGC
EPYYYILANYGNVPFAITATVLGWFTPFLISPLEAFWELSHYKRLQYEYLKKVNGIRLINLKNYEGTSATPTDSISGNSV
PRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27075; Mature: 27075

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00173 XYLOSE_ISOMERASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLALLVLAWLAYAFLGFVKFYATTGCLPLGRLAFVKLHDPDIRPGGLHEMVATNVAHT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
LGYSAVTIVHNAGNERMYGSWTEKNGVLVWNIAALDPRGNRASVDWHGALRELVFADRLR
HCCEEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TATWVHDGPIGGPRFPKNSVIFWHGTVRNGFPLLYGGCGCEPYYYILANYGNVPFAITAT
HHEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHH
VLGWFTPFLISPLEAFWELSHYKRLQYEYLKKVNGIRLINLKNYEGTSATPTDSISGNSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
PRP
CCC
>Mature Secondary Structure
MKVLALLVLAWLAYAFLGFVKFYATTGCLPLGRLAFVKLHDPDIRPGGLHEMVATNVAHT
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
LGYSAVTIVHNAGNERMYGSWTEKNGVLVWNIAALDPRGNRASVDWHGALRELVFADRLR
HCCEEEEEEECCCCCEEECCCCCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
TATWVHDGPIGGPRFPKNSVIFWHGTVRNGFPLLYGGCGCEPYYYILANYGNVPFAITAT
HHEEEECCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCCEEEEEEECCCCCHHHHHH
VLGWFTPFLISPLEAFWELSHYKRLQYEYLKKVNGIRLINLKNYEGTSATPTDSISGNSV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC
PRP
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA