| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095024
Identifier: 20095024
GI number: 20095024
Start: 1598508
End: 1598981
Strand: Direct
Name: 20095024
Synonym: MK1588
Alternate gene names: NA
Gene position: 1598508-1598981 (Clockwise)
Preceding gene: 20095023
Following gene: 20095025
Centisome position: 94.31
GC content: 55.27
Gene sequence:
>474_bases CTGAGGGGGAATCCCGACATCAAGAGGTCAGATCTGAACAAGATGGCGGAACGATTGCTCGCAGGACACAAAATGTTGGG TATCCATTGCCCCGAGTGTAAGGTGCCGCTGTTCCAGGACCCGAAAACGGGAACCGTGAGCTGCCCAATCTGCGGAACGG AGTTCGAGGTGGTAGAGGAGGAGGCGAAGAAGGTCAAGAGAAAAGCGAAGGAGCGCAGGAAGCGGGCTGAAAGTGAGGAG AAGAAGACGAAGTGGGCGGAAAAGAAACCGGAGAGTGGTAAGAAGGAACGAAAACCTGAGAAGGAAAAACAGAAACGTAG ACCGAGACTCCCAGGTAGTGAGGACGTACGGAAGGCCGCCCTTCAAGTGGTCACCGCCAGGTTGAAGCGGGCCGCCGAGA CGAAAGATCCGGAACACGCCTTGCGGGAGCTGGAAGTTGCCGAGAAAGCACTCGAGATCCTCAAAAAGCTGTAA
Upstream 100 bases:
>100_bases TTACAGAGGACGAGAAGAAGGTACGTGAGATAATTGAAGAGGAGGTTGGACGAGAGGTCCCGATGTTCGTGATGAGAGCA CCGGCAGCGTTCCCTTCACC
Downstream 100 bases:
>100_bases GCTGGTATTCGTGGGGGTGGTGAACCGCCAGTTCTCGGAGCTAGCGATCGAGTTAGAGTTTGAAGTAGGGGCCGTTCAGT TCTACGACCCCGATGACCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MRGNPDIKRSDLNKMAERLLAGHKMLGIHCPECKVPLFQDPKTGTVSCPICGTEFEVVEEEAKKVKRKAKERRKRAESEE KKTKWAEKKPESGKKERKPEKEKQKRRPRLPGSEDVRKAALQVVTARLKRAAETKDPEHALRELEVAEKALEILKKL
Sequences:
>Translated_157_residues MRGNPDIKRSDLNKMAERLLAGHKMLGIHCPECKVPLFQDPKTGTVSCPICGTEFEVVEEEAKKVKRKAKERRKRAESEE KKTKWAEKKPESGKKERKPEKEKQKRRPRLPGSEDVRKAALQVVTARLKRAAETKDPEHALRELEVAEKALEILKKL >Mature_157_residues MRGNPDIKRSDLNKMAERLLAGHKMLGIHCPECKVPLFQDPKTGTVSCPICGTEFEVVEEEAKKVKRKAKERRKRAESEE KKTKWAEKKPESGKKERKPEKEKQKRRPRLPGSEDVRKAALQVVTARLKRAAETKDPEHALRELEVAEKALEILKKL
Specific function: Unknown
COG id: COG1645
COG function: function code R; Uncharacterized Zn-finger containing protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18029; Mature: 18029
Theoretical pI: Translated: 10.54; Mature: 10.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGNPDIKRSDLNKMAERLLAGHKMLGIHCPECKVPLFQDPKTGTVSCPICGTEFEVVEE CCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH EAKKVKRKAKERRKRAESEEKKTKWAEKKPESGKKERKPEKEKQKRRPRLPGSEDVRKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHH LQVVTARLKRAAETKDPEHALRELEVAEKALEILKKL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MRGNPDIKRSDLNKMAERLLAGHKMLGIHCPECKVPLFQDPKTGTVSCPICGTEFEVVEE CCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHH EAKKVKRKAKERRKRAESEEKKTKWAEKKPESGKKERKPEKEKQKRRPRLPGSEDVRKAA HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCHHHHHHHCCCCCCHHHHHHHH LQVVTARLKRAAETKDPEHALRELEVAEKALEILKKL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA