Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20095023

Identifier: 20095023

GI number: 20095023

Start: 1597981

End: 1598511

Strand: Direct

Name: 20095023

Synonym: MK1587

Alternate gene names: NA

Gene position: 1597981-1598511 (Clockwise)

Preceding gene: 20095021

Following gene: 20095024

Centisome position: 94.28

GC content: 48.4

Gene sequence:

>531_bases
TTGAAAAAAATCTTTCGGAACGGGGGTTTCGGGGGACCGTTCCTCATGCGTTCCGGAATAAACCGAGACGTAATCGAGGT
ACTGATGGACGTATACGGCTTGACAGAACGACAGGCTACAGTTTCGGTCATGAGATCGGAAGGGATGTCGTATCGGGAAA
TAGCTGAGGAGCTGGGAATTACGGTGTCGGGCGTAAGGAACCACTTAGAACAGGCTCGGATGAAGATGAAAGTAGATAAT
GACTTCCAGATAGCTAGGATCATAGGCAAGCTTGAAATGAGTTTAGGACCGGCGCTAGTCATTGCTATAGTTCCGGTTGA
TAAGTCGGAGGATGTTATCAACAGACTAATTCAGGAAGGCGAAGGAGTTACGGAAATGACTGGACGTGGTGGGTACACAG
GTGAAGAACAGTCTGTTCTGTTTATTATTACAGAGGACGAGAAGAAGGTACGTGAGATAATTGAAGAGGAGGTTGGACGA
GAGGTCCCGATGTTCGTGATGAGAGCACCGGCAGCGTTCCCTTCACCCTGA

Upstream 100 bases:

>100_bases
CCGCTGCTCCAACAGGGTGCAACACTGTTCGAACTTCTCTTCGTAGTCCGACAAGTCGCCACCCCCCTCCGATGAGGACT
GTTGCCGGGCCTCCGACACC

Downstream 100 bases:

>100_bases
GGGGGAATCCCGACATCAAGAGGTCAGATCTGAACAAGATGGCGGAACGATTGCTCGCAGGACACAAAATGTTGGGTATC
CATTGCCCCGAGTGTAAGGT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MKKIFRNGGFGGPFLMRSGINRDVIEVLMDVYGLTERQATVSVMRSEGMSYREIAEELGITVSGVRNHLEQARMKMKVDN
DFQIARIIGKLEMSLGPALVIAIVPVDKSEDVINRLIQEGEGVTEMTGRGGYTGEEQSVLFIITEDEKKVREIIEEEVGR
EVPMFVMRAPAAFPSP

Sequences:

>Translated_176_residues
MKKIFRNGGFGGPFLMRSGINRDVIEVLMDVYGLTERQATVSVMRSEGMSYREIAEELGITVSGVRNHLEQARMKMKVDN
DFQIARIIGKLEMSLGPALVIAIVPVDKSEDVINRLIQEGEGVTEMTGRGGYTGEEQSVLFIITEDEKKVREIIEEEVGR
EVPMFVMRAPAAFPSP
>Mature_176_residues
MKKIFRNGGFGGPFLMRSGINRDVIEVLMDVYGLTERQATVSVMRSEGMSYREIAEELGITVSGVRNHLEQARMKMKVDN
DFQIARIIGKLEMSLGPALVIAIVPVDKSEDVINRLIQEGEGVTEMTGRGGYTGEEQSVLFIITEDEKKVREIIEEEVGR
EVPMFVMRAPAAFPSP

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19623; Mature: 19623

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIFRNGGFGGPFLMRSGINRDVIEVLMDVYGLTERQATVSVMRSEGMSYREIAEELGI
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCC
TVSGVRNHLEQARMKMKVDNDFQIARIIGKLEMSLGPALVIAIVPVDKSEDVINRLIQEG
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCC
EGVTEMTGRGGYTGEEQSVLFIITEDEKKVREIIEEEVGREVPMFVMRAPAAFPSP
CCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC
>Mature Secondary Structure
MKKIFRNGGFGGPFLMRSGINRDVIEVLMDVYGLTERQATVSVMRSEGMSYREIAEELGI
CCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCC
TVSGVRNHLEQARMKMKVDNDFQIARIIGKLEMSLGPALVIAIVPVDKSEDVINRLIQEG
CHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHCC
EGVTEMTGRGGYTGEEQSVLFIITEDEKKVREIIEEEVGREVPMFVMRAPAAFPSP
CCCEEECCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCCHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA