| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20095015
Identifier: 20095015
GI number: 20095015
Start: 1592112
End: 1592303
Strand: Reverse
Name: 20095015
Synonym: MK1579
Alternate gene names: NA
Gene position: 1592303-1592112 (Counterclockwise)
Preceding gene: 20095016
Following gene: 20095014
Centisome position: 93.94
GC content: 60.42
Gene sequence:
>192_bases GTGCCGAAGGTCGTGATCGACTACGACGCGTGCGTCGGAGTATCGGAGTGTGGTGAATGTATCGAAGCCTGCCCGATGGA CGTCCTCGACGAAGAGGACGACAAGCCGGTCGTCGTGAACGAGGATGACTGCACCGGCTGTGGCCTCTGCGAGCAGGCTT GTCCACACGGTGCCATCGAAGTCGAGGTGTAA
Upstream 100 bases:
>100_bases GCGATGAGGACCCGCTGGAAATTGCTAAAAGGGAGTTCGACGAGGGCGTTGTGCCCGTCGTGGTGATCCGCAGATAGAGG GTATGCGGGGGTAAGGGAAG
Downstream 100 bases:
>100_bases CCCCTCTCCCCGGACGTATCTTCCGGGGGTGACTCGATGTCCGAAAACGACGACCTGCTCGTTCCGCTGAACGACTACCT GGCGGCAGGTGTGCACATCG
Product: ferredoxin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 62
Protein sequence:
>63_residues MPKVVIDYDACVGVSECGECIEACPMDVLDEEDDKPVVVNEDDCTGCGLCEQACPHGAIEVEV
Sequences:
>Translated_63_residues MPKVVIDYDACVGVSECGECIEACPMDVLDEEDDKPVVVNEDDCTGCGLCEQACPHGAIEVEV >Mature_62_residues PKVVIDYDACVGVSECGECIEACPMDVLDEEDDKPVVVNEDDCTGCGLCEQACPHGAIEVEV
Specific function: Unknown
COG id: COG1146
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6691; Mature: 6559
Theoretical pI: Translated: 3.43; Mature: 3.43
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
12.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 15.9 %Cys+Met (Translated Protein) 12.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 14.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKVVIDYDACVGVSECGECIEACPMDVLDEEDDKPVVVNEDDCTGCGLCEQACPHGAIE CCCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCEE VEV EEC >Mature Secondary Structure PKVVIDYDACVGVSECGECIEACPMDVLDEEDDKPVVVNEDDCTGCGLCEQACPHGAIE CCEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCHHHCCCCCEE VEV EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA