Click here to switch to the map view.

The map label for this gene is ycbL [C]

Identifier: 20095003

GI number: 20095003

Start: 1581336

End: 1581887

Strand: Direct

Name: ycbL [C]

Synonym: MK1567

Alternate gene names: 20095003

Gene position: 1581336-1581887 (Clockwise)

Preceding gene: 20095002

Following gene: 20095005

Centisome position: 93.3

GC content: 61.96

Gene sequence:

>552_bases
ATGACAGTGGTAGTGGTCGTGCGGAAAGGTAGACTCGTCCGATCAGCGTCCGGCGGCGTGCTAGAGGCCGACTCGTCGTC
TACTCTTATCCTCACGGAGGAGATGAACCTGTTGGTGGACACCGGAGGTGAGGATCCGAAAGGATTGATCCGCGATCTCG
AGCCGTACGGCGTCGACGCCGTCGTCTTCACCCACGGACATCAGGATCACGTAGGCAACGCCCGGGCGATCGCCGAGACG
TTCCACCCGGAGTTCTACGCGCACGAGAGGGAGGCCGGATCGATCCCCGTCGATGTGGATCCCGTCGACTCGTTCGACCC
GCCCGAAGGTGTCGAGGTCATCGAGACCCCGGGTCATACCCCCGGCCATATATCCGTAGTCGTGGAGGACCGGATCGTGA
TCGCCGGGGACGCGTGTCCAACTCCGGATAACGCGTTGGAACGCGTACCGCCGGCGATCAGTTGGGACCGCGAACTCGCG
GAGGAGTCCCTCAGGAAGGTTCTGTCATATCCGGTGGTGATACCGGGACACGGAATACACCTGAAACGCTAG

Upstream 100 bases:

>100_bases
ACCACGCGGCACCGTACCGGATAGCCCATGGAGAACGAGTCGTTCAGGCCGTGTTCCTCCGGGCGGAAGACGCGGGTCGG
TACGAGGGGGACTACGGCCG

Downstream 100 bases:

>100_bases
CGCAGGGGGAGGAGGGACGGATCCTCGTCCGGTGGATGCTCGTCACACGCCTCGAGTAGCATCAGCGAGCGCACCTCCGG
CCCTATACGTCGGAGCTCCG

Product: Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 182

Protein sequence:

>183_residues
MTVVVVVRKGRLVRSASGGVLEADSSSTLILTEEMNLLVDTGGEDPKGLIRDLEPYGVDAVVFTHGHQDHVGNARAIAET
FHPEFYAHEREAGSIPVDVDPVDSFDPPEGVEVIETPGHTPGHISVVVEDRIVIAGDACPTPDNALERVPPAISWDRELA
EESLRKVLSYPVVIPGHGIHLKR

Sequences:

>Translated_183_residues
MTVVVVVRKGRLVRSASGGVLEADSSSTLILTEEMNLLVDTGGEDPKGLIRDLEPYGVDAVVFTHGHQDHVGNARAIAET
FHPEFYAHEREAGSIPVDVDPVDSFDPPEGVEVIETPGHTPGHISVVVEDRIVIAGDACPTPDNALERVPPAISWDRELA
EESLRKVLSYPVVIPGHGIHLKR
>Mature_182_residues
TVVVVVRKGRLVRSASGGVLEADSSSTLILTEEMNLLVDTGGEDPKGLIRDLEPYGVDAVVFTHGHQDHVGNARAIAETF
HPEFYAHEREAGSIPVDVDPVDSFDPPEGVEVIETPGHTPGHISVVVEDRIVIAGDACPTPDNALERVPPAISWDRELAE
ESLRKVLSYPVVIPGHGIHLKR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 19745; Mature: 19614

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVVVVVRKGRLVRSASGGVLEADSSSTLILTEEMNLLVDTGGEDPKGLIRDLEPYGVDA
CEEEEEECCCEEEECCCCCEEEECCCCEEEEEECCEEEEECCCCCHHHHHHCCCCCCCEE
VVFTHGHQDHVGNARAIAETFHPEFYAHEREAGSIPVDVDPVDSFDPPEGVEVIETPGHT
EEEECCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCC
PGHISVVVEDRIVIAGDACPTPDNALERVPPAISWDRELAEESLRKVLSYPVVIPGHGIH
CCEEEEEEECEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCEE
LKR
ECC
>Mature Secondary Structure 
TVVVVVRKGRLVRSASGGVLEADSSSTLILTEEMNLLVDTGGEDPKGLIRDLEPYGVDA
EEEEEECCCEEEECCCCCEEEECCCCEEEEEECCEEEEECCCCCHHHHHHCCCCCCCEE
VVFTHGHQDHVGNARAIAETFHPEFYAHEREAGSIPVDVDPVDSFDPPEGVEVIETPGHT
EEEECCCCCCCCCHHHHHHHHCCCCEECCCCCCCCCEECCCCCCCCCCCCCEEEECCCCC
PGHISVVVEDRIVIAGDACPTPDNALERVPPAISWDRELAEESLRKVLSYPVVIPGHGIH
CCEEEEEEECEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEECCCCEE
LKR
ECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]