| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094993
Identifier: 20094993
GI number: 20094993
Start: 1571504
End: 1571908
Strand: Reverse
Name: 20094993
Synonym: MK1557
Alternate gene names: NA
Gene position: 1571908-1571504 (Counterclockwise)
Preceding gene: 20094994
Following gene: 20094992
Centisome position: 92.74
GC content: 59.75
Gene sequence:
>405_bases ATGGCGGACGTTATCGCCGAGTTCCTGGGCGACGGTGAGTGCACCGTGGAATTCGAGGAAGAGAAGATGGAGCTTGTTAG CGGCAAGGTGGCCGAACCTGGACATGTCACCCCCTACCACCTCTTTTTGGCCGGTATCCTCGCCTGCGTGACGATGAACG CGGGCCATGCGTTGGAGAAGGCCGGAATCGACGCCGAGGTGACGGCGGAGGTGACCGGGGAGAAGGACTGGGACCGCTTG GCGGTGACCGAGATAGAGATCACGATCAAGGTGAAACTGAAGGACGACACAGACCCCGACGAAGCTCGAAAGATCGCCGA GAAGGGTGCCGACCGGTGTATCCTGAGCCGTACCTTGGGTCCAGCTATCGTCAGTAAGGAAGTGGTCGTAGAGCGGGAGA GCTAA
Upstream 100 bases:
>100_bases CCGGTCGAACACTCGTGGACAGTGAGCTCATGGCGGAGATCGAGGACCACTTCAAAACATTTAAAAATTTCAAAAAATCT TGAACTCACGGGGTACGAGA
Downstream 100 bases:
>100_bases CCGGTTCATCCCGGCCCTTCGTTCCCTCCACCCGCGCATATATCACGGACTGTTGGATCGCGTTTACGTCCCAGACGCGG TATCGTCCTTGAGGTGTGTT
Product: OsmC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MADVIAEFLGDGECTVEFEEEKMELVSGKVAEPGHVTPYHLFLAGILACVTMNAGHALEKAGIDAEVTAEVTGEKDWDRL AVTEIEITIKVKLKDDTDPDEARKIAEKGADRCILSRTLGPAIVSKEVVVERES
Sequences:
>Translated_134_residues MADVIAEFLGDGECTVEFEEEKMELVSGKVAEPGHVTPYHLFLAGILACVTMNAGHALEKAGIDAEVTAEVTGEKDWDRL AVTEIEITIKVKLKDDTDPDEARKIAEKGADRCILSRTLGPAIVSKEVVVERES >Mature_133_residues ADVIAEFLGDGECTVEFEEEKMELVSGKVAEPGHVTPYHLFLAGILACVTMNAGHALEKAGIDAEVTAEVTGEKDWDRLA VTEIEITIKVKLKDDTDPDEARKIAEKGADRCILSRTLGPAIVSKEVVVERES
Specific function: Unknown
COG id: COG1765
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14526; Mature: 14394
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVIAEFLGDGECTVEFEEEKMELVSGKVAEPGHVTPYHLFLAGILACVTMNAGHALEK CHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH AGIDAEVTAEVTGEKDWDRLAVTEIEITIKVKLKDDTDPDEARKIAEKGADRCILSRTLG CCCCEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCEEHHHCCC PAIVSKEVVVERES HHHHHHEEEEEECC >Mature Secondary Structure ADVIAEFLGDGECTVEFEEEKMELVSGKVAEPGHVTPYHLFLAGILACVTMNAGHALEK HHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH AGIDAEVTAEVTGEKDWDRLAVTEIEITIKVKLKDDTDPDEARKIAEKGADRCILSRTLG CCCCEEEEEEECCCCCCCEEEEEEEEEEEEEEECCCCCHHHHHHHHHCCCCCEEHHHCCC PAIVSKEVVVERES HHHHHHEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]