Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094992

Identifier: 20094992

GI number: 20094992

Start: 1570848

End: 1571285

Strand: Reverse

Name: 20094992

Synonym: MK1556

Alternate gene names: NA

Gene position: 1571285-1570848 (Counterclockwise)

Preceding gene: 20094993

Following gene: 20094991

Centisome position: 92.7

GC content: 59.36

Gene sequence:

>438_bases
ATGATCCACACCACCCTGTGGATAGCGTTAGCAGGGGTCTGTCTCGTTCTCGCCGGCATCGCTCTGATCTCCGCGATAGT
CGTGGAAGGGACCATCGAAGCCACCACCTGGTTTACGGTCGCCGACCTAGCGGTCTGTGCGGCGGCCATCTACGTCGGGA
TTACCGGCCACCAGTTCTCCTCTTTGCTCCCGACTGTGGGTCTAATCGTTGCTACTTTGATGGCCGTAGCACACGTCACT
TACACGTGGATCAAGGGTATTCTCCGGCTGGTGACGGGGCGGGAGTCCAAGAGCGTTGGAGAGAGACCGGACACACTCCG
TGCGTTCCTCACGCGCGTGCTGGAAAAGCTCGGTTATAAAGGAAAAGTCGACCCCGGAGACCGCGAGGCCGCTAGAAGGG
TGCTCGAAACGTGTCGAAGATGGGGGTGGGACAGGTGA

Upstream 100 bases:

>100_bases
ACCCGCCGTCGCATGCGGGTGTAGCGGTCGGCTTACGAGCGATTACTGCTCGGGGAGAAAAGCTAACGTTCCTCCAAACT
TCCGAACATGTGGGGCTCCG

Downstream 100 bases:

>100_bases
TGACGACGGCGACCGCCGGGGCGGCATCCATCTATTTGGGGGGTAAGCTCGCTTCCGGTAAGGAAGCCTGGAAGTCCGAA
GGAAAGCCGCTCGTCGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 145

Protein sequence:

>145_residues
MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT
YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR

Sequences:

>Translated_145_residues
MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT
YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR
>Mature_145_residues
MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT
YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15778; Mature: 15778

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLLPTVGLIVATLMAVAHVTYTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GKVDPGDREAARRVLETCRRWGWDR
CCCCCCCHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
SLLPTVGLIVATLMAVAHVTYTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC
GKVDPGDREAARRVLETCRRWGWDR
CCCCCCCHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA