| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094992
Identifier: 20094992
GI number: 20094992
Start: 1570848
End: 1571285
Strand: Reverse
Name: 20094992
Synonym: MK1556
Alternate gene names: NA
Gene position: 1571285-1570848 (Counterclockwise)
Preceding gene: 20094993
Following gene: 20094991
Centisome position: 92.7
GC content: 59.36
Gene sequence:
>438_bases ATGATCCACACCACCCTGTGGATAGCGTTAGCAGGGGTCTGTCTCGTTCTCGCCGGCATCGCTCTGATCTCCGCGATAGT CGTGGAAGGGACCATCGAAGCCACCACCTGGTTTACGGTCGCCGACCTAGCGGTCTGTGCGGCGGCCATCTACGTCGGGA TTACCGGCCACCAGTTCTCCTCTTTGCTCCCGACTGTGGGTCTAATCGTTGCTACTTTGATGGCCGTAGCACACGTCACT TACACGTGGATCAAGGGTATTCTCCGGCTGGTGACGGGGCGGGAGTCCAAGAGCGTTGGAGAGAGACCGGACACACTCCG TGCGTTCCTCACGCGCGTGCTGGAAAAGCTCGGTTATAAAGGAAAAGTCGACCCCGGAGACCGCGAGGCCGCTAGAAGGG TGCTCGAAACGTGTCGAAGATGGGGGTGGGACAGGTGA
Upstream 100 bases:
>100_bases ACCCGCCGTCGCATGCGGGTGTAGCGGTCGGCTTACGAGCGATTACTGCTCGGGGAGAAAAGCTAACGTTCCTCCAAACT TCCGAACATGTGGGGCTCCG
Downstream 100 bases:
>100_bases TGACGACGGCGACCGCCGGGGCGGCATCCATCTATTTGGGGGGTAAGCTCGCTTCCGGTAAGGAAGCCTGGAAGTCCGAA GGAAAGCCGCTCGTCGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR
Sequences:
>Translated_145_residues MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR >Mature_145_residues MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFSSLLPTVGLIVATLMAVAHVT YTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYKGKVDPGDREAARRVLETCRRWGWDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15778; Mature: 15778
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SLLPTVGLIVATLMAVAHVTYTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC GKVDPGDREAARRVLETCRRWGWDR CCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MIHTTLWIALAGVCLVLAGIALISAIVVEGTIEATTWFTVADLAVCAAAIYVGITGHQFS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHH SLLPTVGLIVATLMAVAHVTYTWIKGILRLVTGRESKSVGERPDTLRAFLTRVLEKLGYK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCC GKVDPGDREAARRVLETCRRWGWDR CCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA