Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094991

Identifier: 20094991

GI number: 20094991

Start: 1570324

End: 1570851

Strand: Reverse

Name: 20094991

Synonym: MK1555

Alternate gene names: NA

Gene position: 1570851-1570324 (Counterclockwise)

Preceding gene: 20094992

Following gene: 20094988

Centisome position: 92.68

GC content: 57.58

Gene sequence:

>528_bases
GTGATGACGACGGCGACCGCCGGGGCGGCATCCATCTATTTGGGGGGTAAGCTCGCTTCCGGTAAGGAAGCCTGGAAGTC
CGAAGGAAAGCCGCTCGTCGAGCTGGGTACCGTGCTGTACGCTACCGGTCTCCGCCTGTCCGATAGCCCGATCCCCGAAA
ACGTCGCGTTGGTGGCGTTTCGTGGCTTAGAACACGTTCACGTTTACAAGCGAGAGATAGATTTGAACGTCCCCGGATTC
GCCCAGGCGGTGAAGAAGTCCGTCGAACGTCCTGATGATGCGTTCGTGGAAGCCCTGAAGAGTATGTCCCCGACGTTGCG
TTACTGCGTAGATTCCCTGCTTAATCACGACCGGAAGCTGGTCGAGAGGTTTTCCAGGGACATTCTGAGGGTCATGAAGG
GCGCTCTGGGTAGCTCCCCCACCGTGGCCGAAATACTAGACGTCATCGACGAACACGTGGAGGAGGACGAAGGGTGGATT
CCTTGGAACCCAGTTAGGGCGTTGCTCGAAATCCTAGGATGGAGATGA

Upstream 100 bases:

>100_bases
GCGTGCTGGAAAAGCTCGGTTATAAAGGAAAAGTCGACCCCGGAGACCGCGAGGCCGCTAGAAGGGTGCTCGAAACGTGT
CGAAGATGGGGGTGGGACAG

Downstream 100 bases:

>100_bases
CCGACTAAGTTCCGGCCTGAAAACACCACGTCGAACACTTCGGACCGGCCCTAACCAACGCTCTCGGCGATGGAGAGGAC
ATCGCTCATGACGGCGCTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF
AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI
PWNPVRALLEILGWR

Sequences:

>Translated_175_residues
MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF
AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI
PWNPVRALLEILGWR
>Mature_175_residues
MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF
AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI
PWNPVRALLEILGWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19325; Mature: 19325

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAF
CCCCCCCCCHHHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RGLEHVHVYKREIDLNVPGFAQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKL
HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHH
VERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWIPWNPVRALLEILGWR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAF
CCCCCCCCCHHHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
RGLEHVHVYKREIDLNVPGFAQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKL
HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHH
VERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWIPWNPVRALLEILGWR
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA