Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094988

Identifier: 20094988

GI number: 20094988

Start: 1567473

End: 1568744

Strand: Reverse

Name: 20094988

Synonym: MK1552

Alternate gene names: NA

Gene position: 1568744-1567473 (Counterclockwise)

Preceding gene: 20094991

Following gene: 20094987

Centisome position: 92.55

GC content: 59.2

Gene sequence:

>1272_bases
ATGCTTCGGCCCTTCTCCATCCTGGCCTTTATCATGGTGCTGGGAGGAGCGGCACATGCCATCAGTGTACAGGAGTACAC
GTGGGAACTCACCGCGATCAACATCAAAACGGCTGAAGGGGTGATCAAGGCTAAGTTCTCGAAACCCCAAACGGTGCACT
TCCTCGTTCCCGAACCCGACTACGACCAGGTCGACTTCGGTAGAGACGTGGATGGGGACGGGATACCGGATCACATGTGG
TGCGGTGAGCTCGCATCCCTAACCCTGTACAACGTAGCCGTAGCTAAAGGTTGGTGGAAGCCCATCGCAGGCAACGAGTT
GACCCCGGAAGACCTCGAGAAGCGCGAGGAATGGTTCGCTAAGACCACGAACATCCCGGTCGAGGATCCCCAATACGATG
CTCCCAACGCCTCCACGGACCCACCGTGGTTCCCAGCGCTGATCTCGCTGGCGGCGGACCCCGAGCACCCCAACGCCATC
GGAGTGGTGCTCTACGCCCCGCTAGTCACGGTATCGAGGTGGTTCGTCGTCGTGCCACCTATGATGCACGCCGTCGTGGT
CATGGGTGCGACGAGCAACGGACGCTACTTCGTCGTGAAAGATTGCTCCGCGACTCAGGGACCGGACTACGACTGGAAGC
ACGACTACTACCTGGTGCCCGCTTACTCACTGGAGCTGAACATATCGCGGGCTATCCAGGACGTCTTCAACCCGCTGGAG
CAGTACTCCTCCACCATGCCCGTGCTGTTCTTCCCGATCCCAACCGACGGAAAGCTACCACCCGGGCTCGACGAGTTCTT
CCAGGGGGAGAGGACCGTTGACGTCGGTGGCGGGTTGAAGGTGCGGTTCTACGTGTTTCTGGCTTCCACGTTATCCGACG
TGCTGGAGATCTGTCGACATCTGGCTGAGGCTGGCGTTCCAGTGATGTGCGTGGTGAAGGAACCGTTCGCGTGGCTAGCT
TATCAGGGACAGGTGCTGGAGGTACCGCTGGTGGGTACTCACGTACTGCGGATACTTTCCGTACCAATTACCGCGGTTGA
GATCGCACAACCGACCAATTCGAACGGGGCCGAAACCCAGAACCAGCCCACACAACCTAAGGTTTCGAACGCCGAGGGAG
AGGTTGAGCCTAAGGAGAACGAGTCCGAGGCGAACAGCCAGGCGTCCCCAACGTCCTCAAAACGAAGGAAGATTCCCTTG
GTACCGATTGTGCCAGCGCTCCCGAGGGGGACGAACCGTGGCCGAGACTCCGACGGTCAAGTTGAAGGGTAA

Upstream 100 bases:

>100_bases
TCGACAACGGTTCGAGGACTTTCACGAGCTGTCCGGGCTTATCCGGCAACACCACGTCTAACTCGAACCGTTTCATTCCG
AATCCCCCGGGGTGGTCCGC

Downstream 100 bases:

>100_bases
AGACAGGATCGTAGTGTGGCCGGCGTACTTCGACGCCGACCGGTCGAGGTCCGAAGGACGCAAAGTCCCGAAACGGTTAG
CCGTCAGGAACCCTCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MLRPFSILAFIMVLGGAAHAISVQEYTWELTAINIKTAEGVIKAKFSKPQTVHFLVPEPDYDQVDFGRDVDGDGIPDHMW
CGELASLTLYNVAVAKGWWKPIAGNELTPEDLEKREEWFAKTTNIPVEDPQYDAPNASTDPPWFPALISLAADPEHPNAI
GVVLYAPLVTVSRWFVVVPPMMHAVVVMGATSNGRYFVVKDCSATQGPDYDWKHDYYLVPAYSLELNISRAIQDVFNPLE
QYSSTMPVLFFPIPTDGKLPPGLDEFFQGERTVDVGGGLKVRFYVFLASTLSDVLEICRHLAEAGVPVMCVVKEPFAWLA
YQGQVLEVPLVGTHVLRILSVPITAVEIAQPTNSNGAETQNQPTQPKVSNAEGEVEPKENESEANSQASPTSSKRRKIPL
VPIVPALPRGTNRGRDSDGQVEG

Sequences:

>Translated_423_residues
MLRPFSILAFIMVLGGAAHAISVQEYTWELTAINIKTAEGVIKAKFSKPQTVHFLVPEPDYDQVDFGRDVDGDGIPDHMW
CGELASLTLYNVAVAKGWWKPIAGNELTPEDLEKREEWFAKTTNIPVEDPQYDAPNASTDPPWFPALISLAADPEHPNAI
GVVLYAPLVTVSRWFVVVPPMMHAVVVMGATSNGRYFVVKDCSATQGPDYDWKHDYYLVPAYSLELNISRAIQDVFNPLE
QYSSTMPVLFFPIPTDGKLPPGLDEFFQGERTVDVGGGLKVRFYVFLASTLSDVLEICRHLAEAGVPVMCVVKEPFAWLA
YQGQVLEVPLVGTHVLRILSVPITAVEIAQPTNSNGAETQNQPTQPKVSNAEGEVEPKENESEANSQASPTSSKRRKIPL
VPIVPALPRGTNRGRDSDGQVEG
>Mature_423_residues
MLRPFSILAFIMVLGGAAHAISVQEYTWELTAINIKTAEGVIKAKFSKPQTVHFLVPEPDYDQVDFGRDVDGDGIPDHMW
CGELASLTLYNVAVAKGWWKPIAGNELTPEDLEKREEWFAKTTNIPVEDPQYDAPNASTDPPWFPALISLAADPEHPNAI
GVVLYAPLVTVSRWFVVVPPMMHAVVVMGATSNGRYFVVKDCSATQGPDYDWKHDYYLVPAYSLELNISRAIQDVFNPLE
QYSSTMPVLFFPIPTDGKLPPGLDEFFQGERTVDVGGGLKVRFYVFLASTLSDVLEICRHLAEAGVPVMCVVKEPFAWLA
YQGQVLEVPLVGTHVLRILSVPITAVEIAQPTNSNGAETQNQPTQPKVSNAEGEVEPKENESEANSQASPTSSKRRKIPL
VPIVPALPRGTNRGRDSDGQVEG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46483; Mature: 46483

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRPFSILAFIMVLGGAAHAISVQEYTWELTAINIKTAEGVIKAKFSKPQTVHFLVPEPD
CCCHHHHHHHHHHHCCCHHEEEEEHEEEEEEEEEEEECCCEEEEECCCCCEEEEECCCCC
YDQVDFGRDVDGDGIPDHMWCGELASLTLYNVAVAKGWWKPIAGNELTPEDLEKREEWFA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
KTTNIPVEDPQYDAPNASTDPPWFPALISLAADPEHPNAIGVVLYAPLVTVSRWFVVVPP
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHEEEECH
MMHAVVVMGATSNGRYFVVKDCSATQGPDYDWKHDYYLVPAYSLELNISRAIQDVFNPLE
HHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHH
QYSSTMPVLFFPIPTDGKLPPGLDEFFQGERTVDVGGGLKVRFYVFLASTLSDVLEICRH
HHCCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHH
LAEAGVPVMCVVKEPFAWLAYQGQVLEVPLVGTHVLRILSVPITAVEIAQPTNSNGAETQ
HHHCCCCEEEEEECCCEEEEECCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
NQPTQPKVSNAEGEVEPKENESEANSQASPTSSKRRKIPLVPIVPALPRGTNRGRDSDGQ
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCCC
VEG
CCC
>Mature Secondary Structure
MLRPFSILAFIMVLGGAAHAISVQEYTWELTAINIKTAEGVIKAKFSKPQTVHFLVPEPD
CCCHHHHHHHHHHHCCCHHEEEEEHEEEEEEEEEEEECCCEEEEECCCCCEEEEECCCCC
YDQVDFGRDVDGDGIPDHMWCGELASLTLYNVAVAKGWWKPIAGNELTPEDLEKREEWFA
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
KTTNIPVEDPQYDAPNASTDPPWFPALISLAADPEHPNAIGVVLYAPLVTVSRWFVVVPP
HHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHEEEECH
MMHAVVVMGATSNGRYFVVKDCSATQGPDYDWKHDYYLVPAYSLELNISRAIQDVFNPLE
HHEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEEEEEEHHHHHHHHHHHHH
QYSSTMPVLFFPIPTDGKLPPGLDEFFQGERTVDVGGGLKVRFYVFLASTLSDVLEICRH
HHCCCCCEEEEECCCCCCCCCCHHHHHCCCEEEECCCCCEEEEHHHHHHHHHHHHHHHHH
LAEAGVPVMCVVKEPFAWLAYQGQVLEVPLVGTHVLRILSVPITAVEIAQPTNSNGAETQ
HHHCCCCEEEEEECCCEEEEECCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCC
NQPTQPKVSNAEGEVEPKENESEANSQASPTSSKRRKIPLVPIVPALPRGTNRGRDSDGQ
CCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCHHCCCCCEEECCCCCCCCCCCCCCCCCC
VEG
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA