| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
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The map label for this gene is 20094991
Identifier: 20094991
GI number: 20094991
Start: 1570324
End: 1570851
Strand: Reverse
Name: 20094991
Synonym: MK1555
Alternate gene names: NA
Gene position: 1570851-1570324 (Counterclockwise)
Preceding gene: 20094992
Following gene: 20094988
Centisome position: 92.68
GC content: 57.58
Gene sequence:
>528_bases GTGATGACGACGGCGACCGCCGGGGCGGCATCCATCTATTTGGGGGGTAAGCTCGCTTCCGGTAAGGAAGCCTGGAAGTC CGAAGGAAAGCCGCTCGTCGAGCTGGGTACCGTGCTGTACGCTACCGGTCTCCGCCTGTCCGATAGCCCGATCCCCGAAA ACGTCGCGTTGGTGGCGTTTCGTGGCTTAGAACACGTTCACGTTTACAAGCGAGAGATAGATTTGAACGTCCCCGGATTC GCCCAGGCGGTGAAGAAGTCCGTCGAACGTCCTGATGATGCGTTCGTGGAAGCCCTGAAGAGTATGTCCCCGACGTTGCG TTACTGCGTAGATTCCCTGCTTAATCACGACCGGAAGCTGGTCGAGAGGTTTTCCAGGGACATTCTGAGGGTCATGAAGG GCGCTCTGGGTAGCTCCCCCACCGTGGCCGAAATACTAGACGTCATCGACGAACACGTGGAGGAGGACGAAGGGTGGATT CCTTGGAACCCAGTTAGGGCGTTGCTCGAAATCCTAGGATGGAGATGA
Upstream 100 bases:
>100_bases GCGTGCTGGAAAAGCTCGGTTATAAAGGAAAAGTCGACCCCGGAGACCGCGAGGCCGCTAGAAGGGTGCTCGAAACGTGT CGAAGATGGGGGTGGGACAG
Downstream 100 bases:
>100_bases CCGACTAAGTTCCGGCCTGAAAACACCACGTCGAACACTTCGGACCGGCCCTAACCAACGCTCTCGGCGATGGAGAGGAC ATCGCTCATGACGGCGCTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI PWNPVRALLEILGWR
Sequences:
>Translated_175_residues MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI PWNPVRALLEILGWR >Mature_175_residues MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAFRGLEHVHVYKREIDLNVPGF AQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKLVERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWI PWNPVRALLEILGWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19325; Mature: 19325
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAF CCCCCCCCCHHHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RGLEHVHVYKREIDLNVPGFAQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKL HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHH VERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWIPWNPVRALLEILGWR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MMTTATAGAASIYLGGKLASGKEAWKSEGKPLVELGTVLYATGLRLSDSPIPENVALVAF CCCCCCCCCHHHEECCCCCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHH RGLEHVHVYKREIDLNVPGFAQAVKKSVERPDDAFVEALKSMSPTLRYCVDSLLNHDRKL HCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHCHHHH VERFSRDILRVMKGALGSSPTVAEILDVIDEHVEEDEGWIPWNPVRALLEILGWR HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA