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The map label for this gene is SEC65

Identifier: 20094987

GI number: 20094987

Start: 1567196

End: 1567507

Strand: Reverse

Name: SEC65

Synonym: MK1551

Alternate gene names: 20094987

Gene position: 1567507-1567196 (Counterclockwise)

Preceding gene: 20094988

Following gene: 20094986

Centisome position: 92.48

GC content: 59.62

Gene sequence:

>312_bases
GTGGCCGAGACTCCGACGGTCAAGTTGAAGGGTAAAGACAGGATCGTAGTGTGGCCGGCGTACTTCGACGCCGACCGGTC
GAGGTCCGAAGGACGCAAAGTCCCGAAACGGTTAGCCGTCAGGAACCCTCGGCTCACCGAGCTCCGTCACATCGCGGAGA
AGCTAGGACTGAACCCGAAGGTCCAGCGCGACAAGCGGTACCCGAAGCGGTGGTGGGACGACAAGGGAAGGCTGATCGTG
GATAAGGTCGAATCGAAGCGGAAAACCCTCCTCATGATCGCCGAGAAGCTGAAGGAGCGGAGAGAAAGTTGA

Upstream 100 bases:

>100_bases
AACGAGTCCGAGGCGAACAGCCAGGCGTCCCCAACGTCCTCAAAACGAAGGAAGATTCCCTTGGTACCGATTGTGCCAGC
GCTCCCGAGGGGGACGAACC

Downstream 100 bases:

>100_bases
GGGCTCTGGTCGTCAGGGCACCGGGTCTCGAGAGGGAGACGGTTCAAGCCTTCAAGAAGGTCGACCTAGACGCTGAAGTC
GTGTGTCCTGTCGAGCTCGT

Product: signal recognition particle protein Srp19

Products: NA

Alternate protein names: SRP19

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MAETPTVKLKGKDRIVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPKVQRDKRYPKRWWDDKGRLIV
DKVESKRKTLLMIAEKLKERRES

Sequences:

>Translated_103_residues
MAETPTVKLKGKDRIVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPKVQRDKRYPKRWWDDKGRLIV
DKVESKRKTLLMIAEKLKERRES
>Mature_102_residues
AETPTVKLKGKDRIVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPKVQRDKRYPKRWWDDKGRLIVD
KVESKRKTLLMIAEKLKERRES

Specific function: Signal-recognition-particle assembly, binds directly to 7S RNA and mediates binding of the 54 kDa subunit of the SRP

COG id: COG1400

COG function: function code U; Signal recognition particle 19 kDa protein

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SRP19 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SRP19_METKA (Q8TV49)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614834.1
- ProteinModelPortal:   Q8TV49
- SMR:   Q8TV49
- GeneID:   1478146
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1551
- NMPDR:   fig|190192.1.peg.1547
- HOGENOM:   HBG629394
- OMA:   VEACKEL
- ProtClustDB:   PRK00754
- BioCyc:   MKAN190192:MK1551-MONOMER
- HAMAP:   MF_00305
- InterPro:   IPR002778
- InterPro:   IPR022938
- Gene3D:   G3DSA:3.30.56.30
- PANTHER:   PTHR17453

Pfam domain/function: PF01922 SRP19; SSF69695 Signal_recog_particle_SRP19

EC number: NA

Molecular weight: Translated: 12278; Mature: 12146

Theoretical pI: Translated: 11.28; Mature: 11.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETPTVKLKGKDRIVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPK
CCCCCEEEECCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
VQRDKRYPKRWWDDKGRLIVDKVESKRKTLLMIAEKLKERRES
CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AETPTVKLKGKDRIVVWPAYFDADRSRSEGRKVPKRLAVRNPRLTELRHIAEKLGLNPK
CCCCEEEECCCCEEEEECCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCC
VQRDKRYPKRWWDDKGRLIVDKVESKRKTLLMIAEKLKERRES
CCCCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014