Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094924

Identifier: 20094924

GI number: 20094924

Start: 1507688

End: 1508737

Strand: Direct

Name: 20094924

Synonym: MK1488

Alternate gene names: NA

Gene position: 1507688-1508737 (Clockwise)

Preceding gene: 20094918

Following gene: 20094925

Centisome position: 88.95

GC content: 63.24

Gene sequence:

>1050_bases
ATGGAAGAGCCCGAGAACCTCGCCGTCGTGCCGCCGTCATGCGAAGCCGGACCGTGCGGTAACTCCTGCGTTTTCTGTTA
CATCAGGCAGAACCCACCCGAGGTGCTCAGAGAGCACGGTGGAAACGTGGATACGACTCGTCACGACACGTTGAACGATC
CGCACCTGGAGGAGCGCGTCGAGCGAGCCCGCGACCGGTACCCCGACCTCCGACTCAGGATCGTGGACACCGCGGGGAAC
GTGGGAATCGACGAGGGACGCGTCGAGTCCCTGGCGGCGGCCGGGATAGACGAGGTTCAGATCTCGTTGCACACCACGGT
TCCGGAGACGCGGAAGAAACTGATGGGGAACCCGAACGCGGACGAGTTGTTGGAGCTGCTACCGAAGTTCGAGGACGTCG
GCATCGACGTCATCGCCGATCTAGTGCTCACTCCCGGATACAACCTCAGGGAGCTACCCCGCACGTGCGAAGACTTGGAG
ACGATGGGGGCCAGGCAGGTCCGCGTGTTTCCGGTCGGAGGTACGGACCTCGCCCGTGGGTTCCGGTTCCCCACCCGGAG
GGAGTTGGAGTGGATGCGAGAGACCTCCCGGCGATTGGATTGTGAGCTGAATATTGAGGTGATACCCTCACCTACGATCG
ACGCGCTGCTAGGTGAACCCGCGTTCGACCCGCCGGATCTCCCGGAACCGGACTTCGAGGCCGTAATCGTCGTCGGTGAA
CTGGCCGCTCCTATTTTCGAACCGGCGGTCCGAGAGCTGGAGAACGTCGAGCTGCTCGTGGTGAAGAACCGGGTGTTCGG
CGGTGTGATCGGGGCGTCGAGCCTGCTCACCGCGAAGGACGTTCTGAGGGAGATCGAGCGTTACGAGCCTCGGACGGAGT
TCCCGGTCCTGATCCTCCCCGACGCCATGTTCAGTCCCGACGGCAGGACACTCGACGGGTGGTCCCGCGAGGAGTTAGTG
GGGAAGTTAGCGGCGCTCGGGTACACGGTGGTGACGTGCAGAAAACCCGAAGAGGTCGCGAAAGTCCTCGCATCCCCCTC
ACCGTGGTGA

Upstream 100 bases:

>100_bases
CAACCGCTAAGACGCGACATTATCGGGGGATTCGAAGATCCCGTACGAAATCGACGAGCGAGGGGTAGCGCACGAGATCG
ACGAGATCGACTTAGACCTG

Downstream 100 bases:

>100_bases
GCCCTCCGCAAACGCTCCCTTCGTCATCCGTCCGTCCGGGGTGGGCTCGTCATCGGGCGCGCGGCAAGCCTTTTGGTGGA
CCCGCACCCGTCAGGTATGC

Product: NifB/MoaA family Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN
VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE
TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE
LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV
GKLAALGYTVVTCRKPEEVAKVLASPSPW

Sequences:

>Translated_349_residues
MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN
VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE
TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE
LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV
GKLAALGYTVVTCRKPEEVAKVLASPSPW
>Mature_349_residues
MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERVERARDRYPDLRLRIVDTAGN
VGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNADELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLE
TMGARQVRVFPVGGTDLARGFRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE
LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILPDAMFSPDGRTLDGWSREELV
GKLAALGYTVVTCRKPEEVAKVLASPSPW

Specific function: Unknown

COG id: COG1625

COG function: function code C; Fe-S oxidoreductase, related to NifB/MoaA family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38748; Mature: 38748

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERV
CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ERARDRYPDLRLRIVDTAGNVGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNA
HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCH
DELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLETMGARQVRVFPVGGTDLARG
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC
FRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEHH
LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILP
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DAMFSPDGRTLDGWSREELVGKLAALGYTVVTCRKPEEVAKVLASPSPW
CCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCC
>Mature Secondary Structure
MEEPENLAVVPPSCEAGPCGNSCVFCYIRQNPPEVLREHGGNVDTTRHDTLNDPHLEERV
CCCCCCEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHCCCCCCCCCCCCCCCCHHHHHH
ERARDRYPDLRLRIVDTAGNVGIDEGRVESLAAAGIDEVQISLHTTVPETRKKLMGNPNA
HHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCCEEEEEEECCCHHHHHHHCCCCCH
DELLELLPKFEDVGIDVIADLVLTPGYNLRELPRTCEDLETMGARQVRVFPVGGTDLARG
HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHC
FRFPTRRELEWMRETSRRLDCELNIEVIPSPTIDALLGEPAFDPPDLPEPDFEAVIVVGE
CCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHCCCCCCCCCCCCCCCCEEEEEHH
LAAPIFEPAVRELENVELLVVKNRVFGGVIGASSLLTAKDVLREIERYEPRTEFPVLILP
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC
DAMFSPDGRTLDGWSREELVGKLAALGYTVVTCRKPEEVAKVLASPSPW
CCCCCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA