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The map label for this gene is sgcQ [C]

Identifier: 20094899

GI number: 20094899

Start: 1490418

End: 1491233

Strand: Direct

Name: sgcQ [C]

Synonym: MK1463

Alternate gene names: 20094899

Gene position: 1490418-1491233 (Clockwise)

Preceding gene: 20094898

Following gene: 20094900

Centisome position: 87.93

GC content: 63.48

Gene sequence:

>816_bases
GTGAACCGTACAGGCGGTTCACCGGGGGCGTTGCCGTTGGAGGTTGTAGGTGTGGTGCACTTACCGCCGCTGCCAGGGTC
TCCGCGGGCCAAGTCTATCGAGGAGGTAGTTGAGCGAGCCCGCCGGGATGCAGCGCGGCTCGAAGACGGTGGTGTCGACG
CAGTTCTAGTTGAGAACTTCGGGGACACCCCTTACTACCCCGATGACGTGCCCAAGATCACCGTGGCCTGCATGACCAGG
GCGGTGGCTGAAGTCGTCGATACCGTGAGCGTCCCCGTCGGCGTGAACGTGCTACGCAATGACGGTGTAGCGGCCGTCGA
CGTGTGCGCTGCGACCGGCGCCTCCTTTATCCGCGTTAATGCGTACGTGGAGGCCGTCGCTACAGATCAGGGCGTCCTCC
AGCCCGTTGCGCACATGGTCTGGCGCGAGATCGACCGCCTAGGAGTGGACGTCGAGGTATACGCTGATATCAGAGTGAAG
CACGGACGACCTCTGGACGACAGACCCGTCGAAGAGGTCGCACGGGACGCTGTGGAGCGAGGACTAGCCGACGCTGTGAT
CGTCACGGGCTCCGCCACCGGGTCCCCTCCGCGGCCTGAAGAGGTGCGCAAGGTTGCCAGGGTCGTCGATCGAGTTCTGG
TGGGTAGTGGCGTGACTCCGGAAAACGCTCACGTTTTCCTCCGAGCCGGGGCGGCGGGTTTCATAGTGGGGACATACTTC
AAGAAGAACGGGATCACCGAGAACCCGGTGGACGTGGACCGCGTACGTGAGCTGGTGCGGTTCATCCGACGCTCAGGGGT
AGAACGCTGGCCTTGA

Upstream 100 bases:

>100_bases
GGAGCCCAGTTCGATACGATAGCCCTCCTTTCAACGGTGAGCCTCCGACGGACCGAGAAACCGCGGGGGTTCAGCGTGCC
GTGTACCCGCTGTGACGCGC

Downstream 100 bases:

>100_bases
TACAGAAGAGGCTGAACCGTAGGGAGCTCGAATGGGTGAGGAAGAGAGTGGCGCGAGAGGCGGCCAGACTCCTCTACGAG
GGTGCCGTCGACGAGTATAT

Product: TIM-barrel enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MNRTGGSPGALPLEVVGVVHLPPLPGSPRAKSIEEVVERARRDAARLEDGGVDAVLVENFGDTPYYPDDVPKITVACMTR
AVAEVVDTVSVPVGVNVLRNDGVAAVDVCAATGASFIRVNAYVEAVATDQGVLQPVAHMVWREIDRLGVDVEVYADIRVK
HGRPLDDRPVEEVARDAVERGLADAVIVTGSATGSPPRPEEVRKVARVVDRVLVGSGVTPENAHVFLRAGAAGFIVGTYF
KKNGITENPVDVDRVRELVRFIRRSGVERWP

Sequences:

>Translated_271_residues
MNRTGGSPGALPLEVVGVVHLPPLPGSPRAKSIEEVVERARRDAARLEDGGVDAVLVENFGDTPYYPDDVPKITVACMTR
AVAEVVDTVSVPVGVNVLRNDGVAAVDVCAATGASFIRVNAYVEAVATDQGVLQPVAHMVWREIDRLGVDVEVYADIRVK
HGRPLDDRPVEEVARDAVERGLADAVIVTGSATGSPPRPEEVRKVARVVDRVLVGSGVTPENAHVFLRAGAAGFIVGTYF
KKNGITENPVDVDRVRELVRFIRRSGVERWP
>Mature_271_residues
MNRTGGSPGALPLEVVGVVHLPPLPGSPRAKSIEEVVERARRDAARLEDGGVDAVLVENFGDTPYYPDDVPKITVACMTR
AVAEVVDTVSVPVGVNVLRNDGVAAVDVCAATGASFIRVNAYVEAVATDQGVLQPVAHMVWREIDRLGVDVEVYADIRVK
HGRPLDDRPVEEVARDAVERGLADAVIVTGSATGSPPRPEEVRKVARVVDRVLVGSGVTPENAHVFLRAGAAGFIVGTYF
KKNGITENPVDVDRVRELVRFIRRSGVERWP

Specific function: Unknown

COG id: COG0434

COG function: function code R; Predicted TIM-barrel enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BtpA family [H]

Homologues:

Organism=Escherichia coli, GI1790757, Length=259, Percent_Identity=33.2046332046332, Blast_Score=106, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI115532828, Length=263, Percent_Identity=33.8403041825095, Blast_Score=121, Evalue=5e-28,
Organism=Drosophila melanogaster, GI24659916, Length=252, Percent_Identity=33.3333333333333, Blast_Score=115, Evalue=3e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR005137
- InterPro:   IPR011060
- ProDom:   PD011184 [H]

Pfam domain/function: PF03437 BtpA [H]

EC number: NA

Molecular weight: Translated: 29079; Mature: 29079

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRTGGSPGALPLEVVGVVHLPPLPGSPRAKSIEEVVERARRDAARLEDGGVDAVLVENF
CCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GDTPYYPDDVPKITVACMTRAVAEVVDTVSVPVGVNVLRNDGVAAVDVCAATGASFIRVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCEEEHH
AYVEAVATDQGVLQPVAHMVWREIDRLGVDVEVYADIRVKHGRPLDDRPVEEVARDAVER
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHC
GLADAVIVTGSATGSPPRPEEVRKVARVVDRVLVGSGVTPENAHVFLRAGAAGFIVGTYF
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEHHH
KKNGITENPVDVDRVRELVRFIRRSGVERWP
HCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNRTGGSPGALPLEVVGVVHLPPLPGSPRAKSIEEVVERARRDAARLEDGGVDAVLVENF
CCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
GDTPYYPDDVPKITVACMTRAVAEVVDTVSVPVGVNVLRNDGVAAVDVCAATGASFIRVN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHCCCCEEEHH
AYVEAVATDQGVLQPVAHMVWREIDRLGVDVEVYADIRVKHGRPLDDRPVEEVARDAVER
HHHHHHHCCHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCHHHHHHHHHHC
GLADAVIVTGSATGSPPRPEEVRKVARVVDRVLVGSGVTPENAHVFLRAGAAGFIVGTYF
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEHHH
KKNGITENPVDVDRVRELVRFIRRSGVERWP
HCCCCCCCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA