Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is 20094900

Identifier: 20094900

GI number: 20094900

Start: 1491224

End: 1491904

Strand: Direct

Name: 20094900

Synonym: MK1464

Alternate gene names: NA

Gene position: 1491224-1491904 (Clockwise)

Preceding gene: 20094899

Following gene: 20094903

Centisome position: 87.98

GC content: 59.77

Gene sequence:

>681_bases
CTGGCCTTGATACAGAAGAGGCTGAACCGTAGGGAGCTCGAATGGGTGAGGAAGAGAGTGGCGCGAGAGGCGGCCAGACT
CCTCTACGAGGGTGCCGTCGACGAGTATATCGACGCGAAGAGACTGGCCGCCAGGCGCCTAGGTGTCGATGTGATGCCGT
CCAACCGTGAGGTCGCAATCGAACTCGACCGCATCGGGGACGAGCTAGAAGGCGAAGAGAAGCTGCACCGGTTGAAGAGG
CTAAGGGAGGAGGCGCTCAAAGTGATGGAGGCCATCGAGGACCTGGAGCCGCGGCTGATCGGAAGCGTGTGGCGCGGGAA
CATCAAACGGGAAAGTGACATCGATATCGCGGTTCTGGGGACGACGGACCCCGAGGAAGTCATCGAGCGCTTGAAGGAGG
CCGGGATCGAGGTATTGGACGTGGAGGAAGTGGTGATCACGGAGCGCGGTGGGAAACCCCTGGACATTCCGGAACACTAC
GTCAACATCAAAGTTAGGACACCGGGCGGCGAGAAGGCCGAGATCGGCGTCACCGTCAGCAGTCCGGAGCTGGAACGTAA
GGGGCGTGTAGACCTCGGGAGGTGCGATTTCTTCGGAGACAAAATCACGGGATTGAGCGTAGAAGAACTACGGAAACTGC
TTCGAGAGGACCCTTACCGGAAGTTCATACCCCGGGGCTGA

Upstream 100 bases:

>100_bases
TGGGGACATACTTCAAGAAGAACGGGATCACCGAGAACCCGGTGGACGTGGACCGCGTACGTGAGCTGGTGCGGTTCATC
CGACGCTCAGGGGTAGAACG

Downstream 100 bases:

>100_bases
TACCGAACGAGATCTACTTCCACTCCGATCGTGTCCAGTACCTTCTGAACGACGTAATCTACCAGGTCTTCGATAGTCGT
CGGACCGTGGTAAAAAGCCG

Product: DNA polymerase beta family nucleotidyltransferase

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 226; Mature: 225

Protein sequence:

>226_residues
MALIQKRLNRRELEWVRKRVAREAARLLYEGAVDEYIDAKRLAARRLGVDVMPSNREVAIELDRIGDELEGEEKLHRLKR
LREEALKVMEAIEDLEPRLIGSVWRGNIKRESDIDIAVLGTTDPEEVIERLKEAGIEVLDVEEVVITERGGKPLDIPEHY
VNIKVRTPGGEKAEIGVTVSSPELERKGRVDLGRCDFFGDKITGLSVEELRKLLREDPYRKFIPRG

Sequences:

>Translated_226_residues
MALIQKRLNRRELEWVRKRVAREAARLLYEGAVDEYIDAKRLAARRLGVDVMPSNREVAIELDRIGDELEGEEKLHRLKR
LREEALKVMEAIEDLEPRLIGSVWRGNIKRESDIDIAVLGTTDPEEVIERLKEAGIEVLDVEEVVITERGGKPLDIPEHY
VNIKVRTPGGEKAEIGVTVSSPELERKGRVDLGRCDFFGDKITGLSVEELRKLLREDPYRKFIPRG
>Mature_225_residues
ALIQKRLNRRELEWVRKRVAREAARLLYEGAVDEYIDAKRLAARRLGVDVMPSNREVAIELDRIGDELEGEEKLHRLKRL
REEALKVMEAIEDLEPRLIGSVWRGNIKRESDIDIAVLGTTDPEEVIERLKEAGIEVLDVEEVVITERGGKPLDIPEHYV
NIKVRTPGGEKAEIGVTVSSPELERKGRVDLGRCDFFGDKITGLSVEELRKLLREDPYRKFIPRG

Specific function: Unknown

COG id: COG2413

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25884; Mature: 25753

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIQKRLNRRELEWVRKRVAREAARLLYEGAVDEYIDAKRLAARRLGVDVMPSNREVAI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEE
ELDRIGDELEGEEKLHRLKRLREEALKVMEAIEDLEPRLIGSVWRGNIKRESDIDIAVLG
EHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEC
TTDPEEVIERLKEAGIEVLDVEEVVITERGGKPLDIPEHYVNIKVRTPGGEKAEIGVTVS
CCCHHHHHHHHHHCCCEEEEHHHHEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC
SPELERKGRVDLGRCDFFGDKITGLSVEELRKLLREDPYRKFIPRG
CCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCC
>Mature Secondary Structure 
ALIQKRLNRRELEWVRKRVAREAARLLYEGAVDEYIDAKRLAARRLGVDVMPSNREVAI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCEEEE
ELDRIGDELEGEEKLHRLKRLREEALKVMEAIEDLEPRLIGSVWRGNIKRESDIDIAVLG
EHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCEEEEC
TTDPEEVIERLKEAGIEVLDVEEVVITERGGKPLDIPEHYVNIKVRTPGGEKAEIGVTVS
CCCHHHHHHHHHHCCCEEEEHHHHEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC
SPELERKGRVDLGRCDFFGDKITGLSVEELRKLLREDPYRKFIPRG
CCCHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA