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The map label for this gene is RPL24A

Identifier: 20094880

GI number: 20094880

Start: 1477068

End: 1477274

Strand: Reverse

Name: RPL24A

Synonym: MK1444

Alternate gene names: 20094880

Gene position: 1477274-1477068 (Counterclockwise)

Preceding gene: 20094881

Following gene: 20094876

Centisome position: 87.16

GC content: 55.56

Gene sequence:

>207_bases
ATGCCCGATGTTCGGCGCTGTGACTTCTGCGGTCGGATCATTGAGCCAGGGACAGGAAAAATGTTCGTCAAGAACGATGG
CACGATCCTATGGTTCTGCTCCAGCAAGTGCGAGCGTAACATGCTGAAGCTCGGAAGGGATCCGAAGAAGGTTCGCTGGA
CGGAGAAGCATCGGGAGTTCATGGCCGAGCAGCGCGGAGAACTCTAA

Upstream 100 bases:

>100_bases
CATCACTAGAAACGTCAAAGGGCCCGTTCGAGAAGGAGACATCCTACTGCTGAGGGAAACCGAGAGGGAGGCGCGACCGA
TCGAGTAAGGGGGGCTCAGA

Downstream 100 bases:

>100_bases
CCCCACCACACGTCCTCCAAGATACCAGATGTCCTCAGCATTTCCTCCAAGTTTTCCACCGACGATAGGAACTCGACGAC
TTCCTTCAAGTCAAGCTCTG

Product: 50S ribosomal protein L24e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 68; Mature: 67

Protein sequence:

>68_residues
MPDVRRCDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHREFMAEQRGEL

Sequences:

>Translated_68_residues
MPDVRRCDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHREFMAEQRGEL
>Mature_67_residues
PDVRRCDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHREFMAEQRGEL

Specific function: Binds to the 23S rRNA

COG id: COG2075

COG function: function code J; Ribosomal protein L24E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L24e family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL24E_METKA (Q8TVE8)

Other databases:

- EMBL:   AE009439
- RefSeq:   NP_614727.1
- ProteinModelPortal:   Q8TVE8
- SMR:   Q8TVE8
- GeneID:   1478039
- GenomeReviews:   AE009439_GR
- KEGG:   mka:MK1444
- NMPDR:   fig|190192.1.peg.1440
- HOGENOM:   HBG499845
- OMA:   GTGKMFV
- ProtClustDB:   PRK00807
- BioCyc:   MKAN190192:MK1444-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00773
- InterPro:   IPR000988
- InterPro:   IPR011017
- Gene3D:   G3DSA:2.30.170.20
- PANTHER:   PTHR10792
- SMART:   SM00746

Pfam domain/function: PF01246 Ribosomal_L24e

EC number: NA

Molecular weight: Translated: 8064; Mature: 7932

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: PS01073 RIBOSOMAL_L24E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.9 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
11.8 %Cys+Met (Translated Protein)
6.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDVRRCDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHREF
CCCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHH
MAEQRGEL
HHHHCCCC
>Mature Secondary Structure 
PDVRRCDFCGRIIEPGTGKMFVKNDGTILWFCSSKCERNMLKLGRDPKKVRWTEKHREF
CCCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCHHHHHHHCCCCCCCCCCCHHHHHH
MAEQRGEL
HHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11930014