| Definition | Methanopyrus kandleri AV19, complete genome. |
|---|---|
| Accession | NC_003551 |
| Length | 1,694,969 |
Click here to switch to the map view.
The map label for this gene is 20094823
Identifier: 20094823
GI number: 20094823
Start: 1413918
End: 1414901
Strand: Direct
Name: 20094823
Synonym: MK1387
Alternate gene names: NA
Gene position: 1413918-1414901 (Clockwise)
Preceding gene: 20094821
Following gene: 20094824
Centisome position: 83.42
GC content: 64.02
Gene sequence:
>984_bases TTGGAGAGATCGCTCCTCATCAAAACCATTCTCGGGGCCGTCGCAGGGGCGATAGCGCTTTACCTCACCTTGTTCCACCT CGCGGACGTGGACGAGGTCCTCAGAGCCCTCCAACGGGCCGACGTCGCTTGGATCCTGGCGGCGGGCGCGTGCGAGGTAC TGTGGTTCGCGGCGTGCGTGGAAGGATGGAAGAAAACCTTCGAGCCGTTGGGCGGCCGTCCATCCCGAAGACAGCTCTTC CTGATGTACTGCGTCAAACTGATGGTCAACAACCTGATTTCCCTCGCCAGAGTACTCGGCGACGCCATCCGGGTGTACTA CGGAATCCGACTCGGATGGTCGGCGGCTACCGTCATCCCCACCATCGTAGCCGACATCGTACTGGGCAACGCGGGTTATC TGGCGGTGATCCTGCTCGGATGCGCCATCGTGTGGTGCTGCACCGAAGTCTCCCCCTACCTGATTGCGGCGAACGGTGTC GGCGCCGTGGCCGTGGCGGGGCTCTGGGCGCTGTTCGCGTCCGAACGCACGTGTCACGAGGCCTACGAGAGCGTACGCGA CCTCGTCGAAGCGCTCGTACGCCGCGTAGGGTACTCCGTCGGAACGGTCGATGAGCTCGTGGATTCCACGGTGCAGCTGT TTCGGTCCAAGGAAGCGCGATTGGCTTTACTCCAGTACACCGTGGGATGGGCCGCCAGGGTGCTCCGGTTGTACTGCGTC ACCTGGGCGGTCTGGCCCACGGCGTCCCCGTTGATCCCGTTGGTTATGTCCGTCGCGATCCGAGGGTCCGCCGTCGTTTC GGTTTCGCCGGGAGGGCTCGGTATCGTGGAAGGACTGACCACCGGAGTCCTAACCGTGTTGGAGGCGGATCCGAGCCGGG TGATGGCGGCCCTGCTCCTGGACCGTCTCTACTCGTTCGTGATCCCCGTGGCCTTGGGGGCCGTCAGCGTGCCCGTGCTG GAAAGGTACGTCGGTCGGGGGTAA
Upstream 100 bases:
>100_bases CCCGTCCGGGCCGGAGACATCCCGCGACCCGGGTTCAAATCCCGGCCGGGGCACCAAACCGACAATCGTTACGAGGAAAC TAACGATCGGGGAGCGCCCT
Downstream 100 bases:
>100_bases TATGGGTGGAACTCTACCACGAGGTGATCATGCTCAAGGACATCGCGGCGTTGGCCGACGTGCACGTGGGCGTGGAGATC GAGCTCCGCAGGCGTGGAAT
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MERSLLIKTILGAVAGAIALYLTLFHLADVDEVLRALQRADVAWILAAGACEVLWFAACVEGWKKTFEPLGGRPSRRQLF LMYCVKLMVNNLISLARVLGDAIRVYYGIRLGWSAATVIPTIVADIVLGNAGYLAVILLGCAIVWCCTEVSPYLIAANGV GAVAVAGLWALFASERTCHEAYESVRDLVEALVRRVGYSVGTVDELVDSTVQLFRSKEARLALLQYTVGWAARVLRLYCV TWAVWPTASPLIPLVMSVAIRGSAVVSVSPGGLGIVEGLTTGVLTVLEADPSRVMAALLLDRLYSFVIPVALGAVSVPVL ERYVGRG
Sequences:
>Translated_327_residues MERSLLIKTILGAVAGAIALYLTLFHLADVDEVLRALQRADVAWILAAGACEVLWFAACVEGWKKTFEPLGGRPSRRQLF LMYCVKLMVNNLISLARVLGDAIRVYYGIRLGWSAATVIPTIVADIVLGNAGYLAVILLGCAIVWCCTEVSPYLIAANGV GAVAVAGLWALFASERTCHEAYESVRDLVEALVRRVGYSVGTVDELVDSTVQLFRSKEARLALLQYTVGWAARVLRLYCV TWAVWPTASPLIPLVMSVAIRGSAVVSVSPGGLGIVEGLTTGVLTVLEADPSRVMAALLLDRLYSFVIPVALGAVSVPVL ERYVGRG >Mature_327_residues MERSLLIKTILGAVAGAIALYLTLFHLADVDEVLRALQRADVAWILAAGACEVLWFAACVEGWKKTFEPLGGRPSRRQLF LMYCVKLMVNNLISLARVLGDAIRVYYGIRLGWSAATVIPTIVADIVLGNAGYLAVILLGCAIVWCCTEVSPYLIAANGV GAVAVAGLWALFASERTCHEAYESVRDLVEALVRRVGYSVGTVDELVDSTVQLFRSKEARLALLQYTVGWAARVLRLYCV TWAVWPTASPLIPLVMSVAIRGSAVVSVSPGGLGIVEGLTTGVLTVLEADPSRVMAALLLDRLYSFVIPVALGAVSVPVL ERYVGRG
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35123; Mature: 35123
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERSLLIKTILGAVAGAIALYLTLFHLADVDEVLRALQRADVAWILAAGACEVLWFAACV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EGWKKTFEPLGGRPSRRQLFLMYCVKLMVNNLISLARVLGDAIRVYYGIRLGWSAATVIP HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TIVADIVLGNAGYLAVILLGCAIVWCCTEVSPYLIAANGVGAVAVAGLWALFASERTCHE HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHH AYESVRDLVEALVRRVGYSVGTVDELVDSTVQLFRSKEARLALLQYTVGWAARVLRLYCV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TWAVWPTASPLIPLVMSVAIRGSAVVSVSPGGLGIVEGLTTGVLTVLEADPSRVMAALLL HHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH DRLYSFVIPVALGAVSVPVLERYVGRG HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MERSLLIKTILGAVAGAIALYLTLFHLADVDEVLRALQRADVAWILAAGACEVLWFAACV CCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH EGWKKTFEPLGGRPSRRQLFLMYCVKLMVNNLISLARVLGDAIRVYYGIRLGWSAATVIP HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH TIVADIVLGNAGYLAVILLGCAIVWCCTEVSPYLIAANGVGAVAVAGLWALFASERTCHE HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHH AYESVRDLVEALVRRVGYSVGTVDELVDSTVQLFRSKEARLALLQYTVGWAARVLRLYCV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TWAVWPTASPLIPLVMSVAIRGSAVVSVSPGGLGIVEGLTTGVLTVLEADPSRVMAALLL HHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH DRLYSFVIPVALGAVSVPVLERYVGRG HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA