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The map label for this gene is NifD

Identifier: 20094821

GI number: 20094821

Start: 1411726

End: 1412775

Strand: Direct

Name: NifD

Synonym: MK1385

Alternate gene names: NA

Gene position: 1411726-1412775 (Clockwise)

Preceding gene: 20094818

Following gene: 20094823

Centisome position: 83.29

GC content: 65.33

Gene sequence:

>1050_bases
TTGAGCACGTGGCACCCACGACCTGGACCCATCCCGGCAGCCATGTACACGCTTCGGGATCTTCTCGCGGATGCCGTGGT
GCTCCACGGACCTAAAGGATGTTGCTTCCGGACCGCACGCCTGCTCGAGAAGGACGGCGTCCGGGTGTTCGTGACCGGGA
TGGAGGAGGATGACTTCGTGTTCGGGGCCCTGGAAAAGCTCGTCGAACTCCTCGAGTACGTGGAGGAGCGCCTCGAACCG
GAGCTGATCGGGGTCGTCGGAACGTGCGTCTCGTCCATCATTGGGGAAGACCTCGAGGCCGCCGTCGAGGAGGCAGACGT
CGACGCGACCGTCGTCACCGTCGAGGTGCACAACGGAATGGGACCTAACACCGAGGGGGTCATCAGGACCTTAGAGCGGG
CCGCGGAGGCCGGGGTGATCCCAGAAGGGGAGGTGGAACGCCAGAAGAGACTGATGAGGGCAGCGGCCGAGCTCGAGCGT
AGGCGCGGGATGGCCAGTCGGGAGTACCTCGAACCGTGGTCCGGGCACGATCCGTCCGAGGTCGCTCGGGTACTGCTATC
CTCCGAGGACGTGCTCGCCATCCTCAATGCGAAGAAGGAGACCGCCTACCTCTTCGCGGACCCCGTCCTCGAAGTCGGTA
AGCGTGGGGCTTGGGTCCTAGCCAACCTATCCCCGGAGAGCGGTCTCCCCAAGGTACGGCGGGATGCGGAGGTTATCGGA
TCAATTTTTCGGGAGGAAGGGATCGAGTTCGAAGTCACCGGTTCCCTGGACGAGTACGCGGTCACCGGCGAGCTCCTGGC
CGAGAAGATCGAGGAGTTCGATCCCGACTCCGTGCTGATCACCGGGATACCCCATGCCGTCGCGCCGGAAGAGCTCGACG
TCGACGCCACGTTCGTCGCCGTCACCGACGGGCTCCGCGAGGCCTCCGCCCTGCGGGAGCTGGGGTACGATTACGTCGTC
GTCGAGGAGGAAGCCCACGCCCGGGTGCTAGGGCGGCGCGAGATCGTGCCGTCCGACCTCGGGGAGGCCATACGTCAGCT
CAGCGCGTAG

Upstream 100 bases:

>100_bases
CGCCAGCTCCGTGGTATCGGGTTCCATCGGCTTCATAACGTCCAGTACCAACCTCCGGATCTTAGCCATGGGAGACCCCC
TTCGGAGAGGGTGATGGAGT

Downstream 100 bases:

>100_bases
TGCGACAGGACCCCCAACATCAGGCATGAGCCCTGCAGCACGGCATAGTCGCGGAGAACACCGCGGCTCCCCGCGGCCCT
CAACGCTATCAGGTTGGCCA

Product: nitrogenase molybdenum-iron subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 349; Mature: 348

Protein sequence:

>349_residues
MSTWHPRPGPIPAAMYTLRDLLADAVVLHGPKGCCFRTARLLEKDGVRVFVTGMEEDDFVFGALEKLVELLEYVEERLEP
ELIGVVGTCVSSIIGEDLEAAVEEADVDATVVTVEVHNGMGPNTEGVIRTLERAAEAGVIPEGEVERQKRLMRAAAELER
RRGMASREYLEPWSGHDPSEVARVLLSSEDVLAILNAKKETAYLFADPVLEVGKRGAWVLANLSPESGLPKVRRDAEVIG
SIFREEGIEFEVTGSLDEYAVTGELLAEKIEEFDPDSVLITGIPHAVAPEELDVDATFVAVTDGLREASALRELGYDYVV
VEEEAHARVLGRREIVPSDLGEAIRQLSA

Sequences:

>Translated_349_residues
MSTWHPRPGPIPAAMYTLRDLLADAVVLHGPKGCCFRTARLLEKDGVRVFVTGMEEDDFVFGALEKLVELLEYVEERLEP
ELIGVVGTCVSSIIGEDLEAAVEEADVDATVVTVEVHNGMGPNTEGVIRTLERAAEAGVIPEGEVERQKRLMRAAAELER
RRGMASREYLEPWSGHDPSEVARVLLSSEDVLAILNAKKETAYLFADPVLEVGKRGAWVLANLSPESGLPKVRRDAEVIG
SIFREEGIEFEVTGSLDEYAVTGELLAEKIEEFDPDSVLITGIPHAVAPEELDVDATFVAVTDGLREASALRELGYDYVV
VEEEAHARVLGRREIVPSDLGEAIRQLSA
>Mature_348_residues
STWHPRPGPIPAAMYTLRDLLADAVVLHGPKGCCFRTARLLEKDGVRVFVTGMEEDDFVFGALEKLVELLEYVEERLEPE
LIGVVGTCVSSIIGEDLEAAVEEADVDATVVTVEVHNGMGPNTEGVIRTLERAAEAGVIPEGEVERQKRLMRAAAELERR
RGMASREYLEPWSGHDPSEVARVLLSSEDVLAILNAKKETAYLFADPVLEVGKRGAWVLANLSPESGLPKVRRDAEVIGS
IFREEGIEFEVTGSLDEYAVTGELLAEKIEEFDPDSVLITGIPHAVAPEELDVDATFVAVTDGLREASALRELGYDYVVV
EEEAHARVLGRREIVPSDLGEAIRQLSA

Specific function: Unknown

COG id: COG2710

COG function: function code C; Nitrogenase molybdenum-iron protein, alpha and beta chains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1423 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017675
- InterPro:   IPR000510 [H]

Pfam domain/function: PF00148 Oxidored_nitro [H]

EC number: NA

Molecular weight: Translated: 38157; Mature: 38025

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTWHPRPGPIPAAMYTLRDLLADAVVLHGPKGCCFRTARLLEKDGVRVFVTGMEEDDFV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHH
FGALEKLVELLEYVEERLEPELIGVVGTCVSSIIGEDLEAAVEEADVDATVVTVEVHNGM
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEEECCC
GPNTEGVIRTLERAAEAGVIPEGEVERQKRLMRAAAELERRRGMASREYLEPWSGHDPSE
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHH
VARVLLSSEDVLAILNAKKETAYLFADPVLEVGKRGAWVLANLSPESGLPKVRRDAEVIG
HHHHHHCCCCEEEEECCCCHHEEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
SIFREEGIEFEVTGSLDEYAVTGELLAEKIEEFDPDSVLITGIPHAVAPEELDVDATFVA
HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEE
VTDGLREASALRELGYDYVVVEEEAHARVLGRREIVPSDLGEAIRQLSA
EHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
STWHPRPGPIPAAMYTLRDLLADAVVLHGPKGCCFRTARLLEKDGVRVFVTGMEEDDFV
CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCHH
FGALEKLVELLEYVEERLEPELIGVVGTCVSSIIGEDLEAAVEEADVDATVVTVEVHNGM
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEEEEECCC
GPNTEGVIRTLERAAEAGVIPEGEVERQKRLMRAAAELERRRGMASREYLEPWSGHDPSE
CCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHH
VARVLLSSEDVLAILNAKKETAYLFADPVLEVGKRGAWVLANLSPESGLPKVRRDAEVIG
HHHHHHCCCCEEEEECCCCHHEEEEECHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHHH
SIFREEGIEFEVTGSLDEYAVTGELLAEKIEEFDPDSVLITGIPHAVAPEELDVDATFVA
HHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCEEEEE
VTDGLREASALRELGYDYVVVEEEAHARVLGRREIVPSDLGEAIRQLSA
EHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]